Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR233C
Length:
295
Number of sequences:
5887
Description:
YDR233C RTN1 SGDID:S000002641, Chr IV from 930357-929470, Genome Release 64-1-1, reverse complement, Verified ORF, "ER membrane protein that interacts with Sey1p to maintain ER morphology; interacts with exocyst subunit Sec6p, with Yip3p, and with Sbh1p; null mutant has an altered ER morphology; member of the RTNLA (reticulon-like A) subfamily"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q04947    295   RTN1_YEAST Reticulon-like protein 1 OS=Saccha...2950     603     100     100GO:0032541; C:cortical endoplasmic reticulum; IDA:UniProtKB.::GO:0071782; C:endoplasmic reticulum tubular network; IDA:UniProtKB.::GO:0005794; C:Golgi apparatus; IDA:SGD.::GO:0071458; C:integral to cytosolic side of endoplasmic reticulum membrane; IDA:UniProtKB.::GO:0005739; C:mitochondrion; IDA:SGD.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0071786; P:endoplasmic reticulum tubular network organization; IMP:UniProtKB.::GO:0006606; P:protein import into nucleus; IGI:SGD.
2Q12443    393   RTN2_YEAST Reticulon-like protein 2 OS=Saccha...1821e-43     159     36     63GO:0032541; C:cortical endoplasmic reticulum; IDA:SGD.::GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005635; C:nuclear envelope; IDA:SGD.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0071786; P:endoplasmic reticulum tubular network organization; IMP:UniProtKB.
3Q56X72    487   RTNLS_ARATH Reticulon-like protein B21 OS=Ara...1760.0000002     55.5     27     46GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
4Q9NQC3    1192   RTN4_HUMAN Reticulon-4 OS=Homo sapiens (Human...1630.000003     52     25     45GO:0030176; C:integral to endoplasmic reticulum membrane; IDA:UniProtKB.::GO:0005635; C:nuclear envelope; IDA:UniProtKB.::GO:0005886; C:plasma membrane; TAS:Reactome.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0006915; P:apoptotic process; NAS:UniProtKB.::GO:0007413; P:axonal fasciculation; ISS:UniProtKB.::GO:0021801; P:cerebral cortex radial glia guided migration; ISS:UniProtKB.::GO:0071786; P:endoplasmic reticulum tubular network organization; IMP:UniProtKB.::GO:0019987; P:negative regulation of anti-apoptosis; IMP:UniProtKB.::GO:0030517; P:negative regulation of axon extension; IDA:UniProtKB.::GO:0048011; P:nerve growth factor receptor signaling pathway; TAS:Reactome.::GO:0042981; P:regulation of apoptotic process; NAS:UniProtKB.::GO:2000172; P:regulation of branching morphogenesis of a nerve; ISS:UniProtKB.::GO:0030334; P:regulation of cell migration; IDA:MGI.
5Q99P72    1162   RTN4_MOUSE Reticulon-4 OS=Mus musculus (Mouse...1640.000004     52     25     45GO:0030176; C:integral to endoplasmic reticulum membrane; ISS:UniProtKB.::GO:0043025; C:neuronal cell body; IDA:MGI.::GO:0005635; C:nuclear envelope; ISS:UniProtKB.
GO:0001525; P:angiogenesis; IMP:MGI.::GO:0007413; P:axonal fasciculation; IMP:UniProtKB.::GO:0060317; P:cardiac epithelial to mesenchymal transition; IMP:MGI.::GO:0021801; P:cerebral cortex radial glia guided migration; IMP:UniProtKB.::GO:0019987; P:negative regulation of anti-apoptosis; ISS:UniProtKB.::GO:0030517; P:negative regulation of axon extension; IMP:UniProtKB.::GO:2000172; P:regulation of branching morphogenesis of a nerve; IMP:UniProtKB.
6Q9JK11    1163   RTN4_RAT Reticulon-4 OS=Rattus norvegicus (Ra...1630.000005     51.6     25     45GO:0030176; C:integral to endoplasmic reticulum membrane; IDA:UniProtKB.::GO:0043209; C:myelin sheath; IDA:RGD.::GO:0043005; C:neuron projection; IDA:RGD.::GO:0043025; C:neuronal cell body; IDA:RGD.::GO:0005635; C:nuclear envelope; ISS:UniProtKB.::GO:0005886; C:plasma membrane; IDA:RGD.::GO:0043234; C:protein complex; IDA:RGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0032403; F:protein complex binding; IDA:RGD.
GO:0007568; P:aging; IEP:RGD.::GO:0007413; P:axonal fasciculation; IDA:UniProtKB.::GO:0021801; P:cerebral cortex radial glia guided migration; ISS:UniProtKB.::GO:0019987; P:negative regulation of anti-apoptosis; ISS:UniProtKB.::GO:0030517; P:negative regulation of axon extension; IDA:UniProtKB.::GO:0045665; P:negative regulation of neuron differentiation; IDA:RGD.::GO:0070571; P:negative regulation of neuron projection regeneration; IMP:RGD.::GO:0021553; P:olfactory nerve development; IEP:RGD.::GO:0048709; P:oligodendrocyte differentiation; IEP:RGD.::GO:0033603; P:positive regulation of dopamine secretion; IMP:RGD.::GO:0045687; P:positive regulation of glial cell differentiation; IDA:RGD.::GO:0048679; P:regulation of axon regeneration; IDA:RGD.::GO:2000172; P:regulation of branching morphogenesis of a nerve; IDA:UniProtKB.::GO:0051930; P:regulation of sensory perception of pain; IDA:RGD.::GO:0014823; P:response to activity; IEP:RGD.
7Q28D16    213   RTN3_XENTR Reticulon-3 OS=Xenopus tropicalis ...1900.000006     49.7     27     39GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
8Q5J6M8    214   RTN3A_XENLA Reticulon-3-A OS=Xenopus laevis (...1800.00001     49.3     28     41GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
9O95197    1032   RTN3_HUMAN Reticulon-3 OS=Homo sapiens (Human...2040.00002     50.1     24     43GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0005615; C:extracellular space; TAS:ProtInc.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0071786; P:endoplasmic reticulum tubular network organization; IMP:UniProtKB.::GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
10Q9ES97    964   RTN3_MOUSE Reticulon-3 OS=Mus musculus (Mouse...2040.00004     48.9     24     46GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
11Q68EW1    214   RTN3B_XENLA Reticulon-3-B OS=Xenopus laevis (...1800.00005     47     27     41GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
12Q5RBL9    236   RTN3_PONAB Reticulon-3 OS=Pongo abelii (Sumat...2140.00008     46.6     24     44GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
13Q08D83    256   RTN3_BOVIN Reticulon-3 OS=Bos taurus (Bovine)...2090.0001     46.2     23     44GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
14Q6RJR6    940   RTN3_RAT Reticulon-3 OS=Rattus norvegicus (Ra...2040.0002     46.6     24     46GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
15A7MC64    764   RTN1_XENTR Reticulon-1 OS=Xenopus tropicalis ...1720.0004     45.4     25     42GO:0005789; C:endoplasmic reticulum membrane; ISS:UniProtKB.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; ISS:UniProtKB.
16Q5MY90    752   RTN1B_XENLA Reticulon-1-B OS=Xenopus laevis (...1720.0008     44.3     26     40GO:0005789; C:endoplasmic reticulum membrane; ISS:UniProtKB.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; ISS:UniProtKB.
17Q6IFY7    207   RTN1A_XENLA Reticulon-1-A OS=Xenopus laevis (...1940.001     43.1     25     41GO:0005789; C:endoplasmic reticulum membrane; IDA:UniProtKB.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IDA:UniProtKB.
18Q6DR04    431   RTNLQ_ARATH Reticulon-like protein B17 OS=Ara...1780.002     43.1     26     40GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
19Q4FZ58    321   RTN2_XENTR Reticulon-2 OS=Xenopus tropicalis ...1730.003     42.4     24     43GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
20Q9SH59    255   RTNLC_ARATH Reticulon-like protein B3 OS=Arab...2040.003     42     24     42GO:0071782; C:endoplasmic reticulum tubular network; IDA:UniProtKB.::GO:0071458; C:integral to cytosolic side of endoplasmic reticulum membrane; IDA:UniProtKB.::GO:0009506; C:plasmodesma; IDA:TAIR.::GO:0005774; C:vacuolar membrane; IEA:UniProtKB-SubCell.
GO:0071786; P:endoplasmic reticulum tubular network organization; IMP:UniProtKB.
21Q8LDS3    457   RTNLR_ARATH Reticulon-like protein B18 OS=Ara...1740.004     42     22     45GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
22Q4FZ76    321   RTN2_XENLA Reticulon-2 OS=Xenopus laevis (Afr...1730.005     41.6     24     43GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; NAS:UniProtKB.
23Q9M145    244   RTNLG_ARATH Reticulon-like protein B7 OS=Arab...770.012     40     25     49GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
24P53694    308   RTN1_SCHPO Reticulon-like protein 1 OS=Schizo...1760.014     40     26     45GO:0032153; C:cell division site; IDA:PomBase.::GO:0032541; C:cortical endoplasmic reticulum; IDA:PomBase.::GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:PomBase.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0034613; P:cellular protein localization; IMP:PomBase.::GO:0071786; P:endoplasmic reticulum tubular network organization; IMP:PomBase.::GO:2000073; P:regulation of site selection involved in cell cycle cytokinesis; IMP:PomBase.
25Q9SUT9    271   RTNLB_ARATH Reticulon-like protein B2 OS=Arab...1810.027     39.3     20     43GO:0071782; C:endoplasmic reticulum tubular network; IDA:UniProtKB.::GO:0005794; C:Golgi apparatus; IDA:TAIR.::GO:0071458; C:integral to cytosolic side of endoplasmic reticulum membrane; IDA:UniProtKB.::GO:0005886; C:plasma membrane; IDA:TAIR.
GO:0071786; P:endoplasmic reticulum tubular network organization; IMP:UniProtKB.
26Q8K0T0    780   RTN1_MOUSE Reticulon-1 OS=Mus musculus (Mouse...1720.042     39.3     26     43GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
27Q64548    777   RTN1_RAT Reticulon-1 OS=Rattus norvegicus (Ra...1720.042     38.9     26     43GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
28Q5IS59    776   RTN1_PANTR Reticulon-1 OS=Pan troglodytes (Ch...1720.067     38.5     26     43GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
29Q16799    776   RTN1_HUMAN Reticulon-1 OS=Homo sapiens (Human...1720.069     38.5     26     43GO:0030176; C:integral to endoplasmic reticulum membrane; TAS:UniProtKB.
GO:0004871; F:signal transducer activity; NAS:UniProtKB.
GO:0030182; P:neuron differentiation; IEP:UniProtKB.
30Q9SUR3    275   RTNLA_ARATH Reticulon-like protein B1 OS=Arab...2130.14     37     22     39GO:0071782; C:endoplasmic reticulum tubular network; IDA:UniProtKB.::GO:0071458; C:integral to cytosolic side of endoplasmic reticulum membrane; IDA:UniProtKB.::GO:0005886; C:plasma membrane; IDA:TAIR.::GO:0005773; C:vacuole; IDA:TAIR.
GO:0071786; P:endoplasmic reticulum tubular network organization; IMP:UniProtKB.
31Q8GYH6    226   RTNLP_ARATH Reticulon-like protein B16 OS=Ara...450.2     36.2     31     62GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
records
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