Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR233C
Length:
295
Number of sequences:
5887
Description:
YDR233C RTN1 SGDID:S000002641, Chr IV from 930357-929470, Genome Release 64-1-1, reverse complement, Verified ORF, "ER membrane protein that interacts with Sey1p to maintain ER morphology; interacts with exocyst subunit Sec6p, with Yip3p, and with Sbh1p; null mutant has an altered ER morphology; member of the RTNLA (reticulon-like A) subfamily"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q8GYH6    226   RTNLP_ARATH Reticulon-like protein B16 OS=Ara...450.2     36.2     31     62GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
32O82352    255   RTNLE_ARATH Reticulon-like protein B5 OS=Arab...2040.33     35.8     20     41GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IDA:TAIR.
GO:0080167; P:response to karrikin; IEP:TAIR.
33Q6S5H8    742   TPC1_HORVU Two pore calcium channel protein 1...910.79     35     29     52GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0005262; F:calcium channel activity; IEA:UniProtKB-KW.::GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0005244; F:voltage-gated ion channel activity; IEA:UniProtKB-KW.
GO:0006952; P:defense response; IEA:UniProtKB-KW.
34Q06640    478   YD306_YEAST F-box protein YDR306C OS=Saccharo...752     33.5     29     45GO:0019005; C:SCF ubiquitin ligase complex; IDA:SGD.
GO:0016567; P:protein ubiquitination; IC:GOC.::GO:0031146; P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; IC:SGD.
35Q9LT71    200   RTNLK_ARATH Reticulon-like protein B11 OS=Ara...1852     33.1     18     39GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
36Q9ZU43    191   RTNLO_ARATH Reticulon-like protein B15 OS=Ara...962     33.1     22     50GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
37Q8G3N0    597   SYP_BIFLO Proline--tRNA ligase OS=Bifidobacte...862.4     33.5     31     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004827; F:proline-tRNA ligase activity; IEA:EC.
GO:0006433; P:prolyl-tRNA aminoacylation; IEA:InterPro.
38Q4ADV7    1423   RIC1_HUMAN Protein RIC1 homolog OS=Homo sapie...1273.4     33.1     20     40GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
39Q9FFS0    257   RTNLD_ARATH Reticulon-like protein B4 OS=Arab...534.2     32.3     32     58GO:0071782; C:endoplasmic reticulum tubular network; IDA:UniProtKB.::GO:0071458; C:integral to cytosolic side of endoplasmic reticulum membrane; IDA:UniProtKB.::GO:0005886; C:plasma membrane; IDA:TAIR.::GO:0009506; C:plasmodesma; IDA:TAIR.
GO:0071786; P:endoplasmic reticulum tubular network organization; IMP:UniProtKB.
40Q9LJQ5    225   RTNLI_ARATH Reticulon-like protein B9 OS=Arab...1805.1     32     24     42GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
41Q6DBN4    253   RTNLF_ARATH Reticulon-like protein B6 OS=Arab...1997.1     31.6     20     42GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
42Q6YLX9    742   TPC1_WHEAT Two pore calcium channel protein 1...917.1     32     27     49GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0005262; F:calcium channel activity; IEA:UniProtKB-KW.::GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0005244; F:voltage-gated ion channel activity; IEA:UniProtKB-KW.
GO:0006952; P:defense response; IEA:UniProtKB-KW.
43P49425    558   MANA_RHOM4 Mannan endo-1,4-beta-mannosidase O...279.5     31.6     48     67
GO:0030246; F:carbohydrate binding; IEA:InterPro.::GO:0043169; F:cation binding; IEA:InterPro.::GO:0008810; F:cellulase activity; IEA:InterPro.::GO:0016985; F:mannan endo-1,4-beta-mannosidase activity; IEA:EC.
GO:0006080; P:substituted mannan metabolic process; IEA:InterPro.
records
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