Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR210C-D
Length:
1755
Number of sequences:
5887
Description:
YDR210C-D YDR210C-D SGDID:S000007410, Chr IV from 882621-878659,883927-882623, Genome Release 64-1-1, reverse complement, transposable_element_gene, "Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
91Q12392    438   YD21A_YEAST Transposon Ty2-DR1 Gag polyprotei...4364e-126     408     51     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
92P0C2J7    1802   YH41B_YEAST Transposon Ty4-H Gag-Pol polyprot...2959e-32     140     31     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0032196; P:transposition; IEA:UniProtKB-KW.::GO:0046797; P:viral procapsid maturation; IEA:UniProtKB-KW.
93P47024    1803   YJ41B_YEAST Transposon Ty4-J Gag-Pol polyprot...2951e-31     139     31     48GO:0005739; C:mitochondrion; IDA:SGD.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0032196; P:transposition; IEA:UniProtKB-KW.::GO:0046797; P:viral procapsid maturation; IEA:UniProtKB-KW.
94P04146    1409   COPIA_DROME Copia protein OS=Drosophila melan...4730.00000000003     72.8     23     41
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:InterPro.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
95P10978    1328   POLX_TOBAC Retrovirus-related Pol polyprotein...4032e-19     99.4     23     42
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:InterPro.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
96Q87040    1146   POL_SFVCP Pro-Pol polyprotein OS=Simian foamy...2050.00006     52     26     42GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.::GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0019012; C:virion; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006278; P:RNA-dependent DNA replication; IEA:InterPro.
97P14350    1143   POL_FOAMV Pro-Pol polyprotein OS=Human spumar...2050.0005     48.9     25     41GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.::GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0019012; C:virion; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006278; P:RNA-dependent DNA replication; IEA:InterPro.
98P25600    308   YCH4_YEAST Putative transposon Ty5-1 protein ...3280.0006     47.4     22     41
99P0A3L4    195   Y4601_AGRT7 Insertion element IS136 uncharact...850.077     40     29     51
GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:InterPro.
100P0A3L3    195   Y4601_AGRT5 Insertion element IS136 uncharact...850.077     40     29     51
GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:InterPro.
101P0AAV4    218   YBGJ_ECOLI Uncharacterized protein ybgJ OS=Es...890.077     40.4     31     42
GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
102P0AAV5    218   YBGJ_ECO57 Uncharacterized protein ybgJ OS=Es...890.077     40.4     31     42
GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
103Q6P6R0    348   LFG1_RAT Protein lifeguard 1 OS=Rattus norveg...1480.22     39.7     30     36GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0005261; F:cation channel activity; NAS:RGD.
104O93209    1156   POL_FFV Pro-Pol polyprotein OS=Feline foamy v...1750.34     39.7     22     42GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.::GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0019012; C:virion; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006278; P:RNA-dependent DNA replication; IEA:InterPro.
105Q32L53    366   LFG1_BOVIN Protein lifeguard 1 OS=Bos taurus ...1240.37     38.9     27     36GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
106Q49378    294   P32_MYCGA P32 adhesin OS=Mycoplasma gallisept...1301.4     37     29     37GO:0033111; C:attachment organelle membrane; IEA:UniProtKB-SubCell.::GO:0042995; C:cell projection; IEA:UniProtKB-KW.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
GO:0020035; P:cytoadherence to microvasculature, mediated by symbiont protein; IEA:UniProtKB-KW.::GO:0007157; P:heterophilic cell-cell adhesion; IEA:InterPro.::GO:0009405; P:pathogenesis; IEA:UniProtKB-KW.
107P50555    461   TNR1A_PIG Tumor necrosis factor receptor supe...661.6     37     30     48GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.::GO:0005031; F:tumor necrosis factor-activated receptor activity; ISS:UniProtKB.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0006954; P:inflammatory response; ISS:UniProtKB.::GO:0050729; P:positive regulation of inflammatory response; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006693; P:prostaglandin metabolic process; IEA:InterPro.
108Q5VST9    7968   OBSCN_HUMAN Obscurin OS=Homo sapiens (Human)....783.9     36.2     33     42GO:0005829; C:cytosol; TAS:Reactome.::GO:0031430; C:M band; ISS:BHF-UCL.::GO:0030018; C:Z disc; ISS:BHF-UCL.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005543; F:phospholipid binding; IEA:InterPro.::GO:0004674; F:protein serine/threonine kinase activity; IEA:UniProtKB-KW.::GO:0004713; F:protein tyrosine kinase activity; IEA:InterPro.::GO:0005089; F:Rho guanyl-nucleotide exchange factor activity; IEA:InterPro.::GO:0008307; F:structural constituent of muscle; NAS:BHF-UCL.::GO:0031432; F:titin binding; IPI:BHF-UCL.
GO:0006915; P:apoptotic process; TAS:Reactome.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0008624; P:induction of apoptosis by extracellular signals; TAS:Reactome.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0048011; P:nerve growth factor receptor signaling pathway; TAS:Reactome.::GO:0035023; P:regulation of Rho protein signal transduction; IEA:InterPro.::GO:0007264; P:small GTPase mediated signal transduction; TAS:Reactome.
109Q88W97    207   RECU_LACPL Holliday junction resolvase recU O...494.5     34.7     41     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
110Q5L3Q9    290   ECFA2_GEOKA Energy-coupling factor transporte...865.1     35     35     48GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.
GO:0006810; P:transport; IEA:UniProtKB-KW.
111Q6ZNG9    492   KRBA2_HUMAN KRAB-A domain-containing protein ...1295.7     35.4     23     43GO:0005622; C:intracellular; IEA:InterPro.
GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
112Q9ESF4    345   LFG1_MOUSE Protein lifeguard 1 OS=Mus musculu...1289.6     34.3     32     36GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
records
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