UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YDR195W

Length:

533

Number of sequences:

5887

Description:

YDR195W REF2 SGDID:S000002603, Chr IV from 848599-850200, Genome Release 64-1-1, Verified ORF, "RNA-binding protein involved in the cleavage step of mRNA 3'-end formation prior to polyadenylation, and in snoRNA maturation; part of holo-CPF subcomplex APT, which associates with 3'-ends of snoRNA- and mRNA-encoding genes"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
1	P42073	533	REF2_YEAST RNA end formation protein 2 OS=Sac...	533	0	1074	100	100	GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:SGD.
									GO:0003682; F:chromatin binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IDA:SGD.
									GO:0006378; P:mRNA polyadenylation; IMP:SGD.::GO:0031126; P:snoRNA 3'-end processing; IMP:SGD.::GO:0030846; P:termination of RNA polymerase II transcription, poly(A)-coupled; IMP:SGD.
2	Q50756	659	HDRA_METTM CoB--CoM heterodisulfide reductase...	131	1.4	35.4	24	44
									GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0051912; F:CoB--CoM heterodisulfide reductase activity; IDA:UniProtKB.::GO:0009055; F:electron carrier activity; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
									GO:0015948; P:methanogenesis; IDA:UniProtKB.
3	Q8QFX1	1325	RIMB2_CHICK RIMS-binding protein 2 OS=Gallus ...	40	1.9	35	43	58	GO:0030054; C:cell junction; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0045202; C:synapse; IEA:UniProtKB-SubCell.
									GO:0010923; P:negative regulation of phosphatase activity; ISS:UniProtKB.
4	Q8BL99	2399	DOP1_MOUSE Protein dopey-1 OS=Mus musculus (M...	80	5.2	33.9	33	49
									GO:0015031; P:protein transport; IEA:UniProtKB-KW.

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