Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR192C
Length:
430
Number of sequences:
5887
Description:
YDR192C NUP42 SGDID:S000002600, Chr IV from 844861-843569, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of the nuclear pore complex (NPC) that localizes exclusively to the cytoplasmic side; involved in RNA export, most likely at a terminal step; interacts with Gle1p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P49686    430   NUP42_YEAST Nucleoporin NUP42 OS=Saccharomyce...4300     788     100     100GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; TAS:SGD.
GO:0031990; P:mRNA export from nucleus in response to heat stress; IMP:SGD.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IGI:SGD.::GO:0000973; P:posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery; IMP:SGD.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
2P40477    1460   NU159_YEAST Nucleoporin NUP159 OS=Saccharomyc...3710.0002     47.8     30     44GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0055126; C:Nup82 complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; TAS:SGD.
GO:0097064; P:ncRNA export from nucleus; IMP:SGD.::GO:0031081; P:nuclear pore distribution; IMP:SGD.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:SGD.::GO:0006611; P:protein export from nucleus; IMP:SGD.::GO:0000055; P:ribosomal large subunit export from nucleus; IMP:SGD.::GO:0000056; P:ribosomal small subunit export from nucleus; IMP:SGD.
3O60318    1980   MCM3A_HUMAN 80 kDa MCM3-associated protein OS...2550.002     43.9     24     39GO:0005829; C:cytosol; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0003677; F:DNA binding; TAS:ProtInc.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0006260; P:DNA replication; TAS:ProtInc.::GO:0006606; P:protein import into nucleus; TAS:ProtInc.
4G5EEH9    1678   NUP98_CAEEL Nuclear pore complex protein Nup9...2480.49     36.6     34     47GO:0005643; C:nuclear pore; IEA:InterPro.::GO:0043186; C:P granule; IDA:WormBase.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0008406; P:gonad development; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040039; P:inductive cell migration; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0006997; P:nucleus organization; IMP:WormBase.::GO:0006810; P:transport; IEA:InterPro.
5Q6YXY2    1668   HACL1_ORYSJ Probable histone acetyltransferas...2340.77     36.2     25     36GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004402; F:histone acetyltransferase activity; IEA:EC.::GO:0003712; F:transcription cofactor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
6Q5SNZ0    1873   GRDN_MOUSE Girdin OS=Mus musculus (Mouse). GN...1260.85     35.8     27     44GO:0016023; C:cytoplasmic membrane-bounded vesicle; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; ISS:UniProtKB.::GO:0005783; C:endoplasmic reticulum; ISS:UniProtKB.::GO:0005794; C:Golgi apparatus; ISS:UniProtKB.::GO:0030027; C:lamellipodium; ISS:UniProtKB.::GO:0005886; C:plasma membrane; ISS:UniProtKB.
GO:0003779; F:actin binding; ISS:UniProtKB.::GO:0008017; F:microtubule binding; IDA:UniProtKB.::GO:0035091; F:phosphatidylinositol binding; ISS:UniProtKB.::GO:0042803; F:protein homodimerization activity; ISS:UniProtKB.::GO:0043422; F:protein kinase B binding; IPI:UniProtKB.
GO:0032148; P:activation of protein kinase B activity; IDA:UniProtKB.::GO:0016477; P:cell migration; ISS:UniProtKB.::GO:0016044; P:cellular membrane organization; ISS:UniProtKB.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0030032; P:lamellipodium assembly; ISS:UniProtKB.::GO:0000226; P:microtubule cytoskeleton organization; IEA:InterPro.::GO:0032956; P:regulation of actin cytoskeleton organization; ISS:UniProtKB.::GO:0042127; P:regulation of cell proliferation; IMP:UniProtKB.::GO:0006275; P:regulation of DNA replication; IMP:UniProtKB.::GO:0010975; P:regulation of neuron projection development; IDA:UniProtKB.::GO:0031929; P:TOR signaling cascade; IDA:UniProtKB.
7Q9WUU9    1971   MCM3A_MOUSE 80 kDa MCM3-associated protein OS...2700.99     35.8     25     38GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI.
GO:0000166; F:nucleotide binding; IEA:InterPro.
8Q5FVW4    449   NUPL2_XENTR Nucleoporin-like protein 2 OS=Xen...302.4     34.3     43     63GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
9Q8ILR9    4662   YPF17_PLAF7 Protein PF14_0175 OS=Plasmodium f...2023.8     33.9     22     36GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
records
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