Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR174W
Length:
246
Number of sequences:
5887
Description:
YDR174W HMO1 SGDID:S000002581, Chr IV from 812110-812850, Genome Release 64-1-1, Verified ORF, "Chromatin associated high mobility group (HMG) family member involved in genome maintenance; rDNA-binding component of the Pol I transcription system; associates with a 5'-3' DNA helicase and Fpr1p, a prolyl isomerase"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q03973    246   HMO1_YEAST High mobility group protein 1 OS=S...2467e-178     496     100     100GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005730; C:nucleolus; IDA:SGD.
GO:0008301; F:DNA binding, bending; IDA:SGD.::GO:0003690; F:double-stranded DNA binding; IDA:SGD.::GO:0000400; F:four-way junction DNA binding; IDA:SGD.
GO:0060962; P:regulation of ribosomal protein gene transcription from RNA polymerase II promoter; IMP:SGD.::GO:0034401; P:regulation of transcription by chromatin organization; IDA:SGD.::GO:0006356; P:regulation of transcription from RNA polymerase I promoter; IMP:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
2P87057    108   NHP6_SCHPO Non-histone chromosomal protein 6 ...930.000007     47.4     29     54GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; ISS:PomBase.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006338; P:chromatin remodeling; ISS:PomBase.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; ISS:PomBase.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:PomBase.::GO:0006359; P:regulation of transcription from RNA polymerase III promoter; ISS:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
3Q09390    235   HMG12_CAEEL High mobility group protein 1.2 O...610.7     34.3     31     56GO:0005634; C:nucleus; IDA:WormBase.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0001708; P:cell fate specification; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0008406; P:gonad development; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0040018; P:positive regulation of multicellular organism growth; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0040025; P:vulval development; IMP:WormBase.::GO:0016055; P:Wnt receptor signaling pathway; IGI:WormBase.
4Q9SUP7    456   HMGB6_ARATH High mobility group B protein 6 O...810.34     35.8     32     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IDA:TAIR.
5Q4WY33    104   NHP6_ASPFU Non-histone chromosomal protein 6 ...870.00002     45.8     30     60GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
6Q5B995    106   NHP6_EMENI Non-histone chromosomal protein 6 ...780.00004     45.4     29     59GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
7O04235    642   SSRP1_VICFA FACT complex subunit SSRP1 OS=Vic...770.00004     47.8     34     56GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
8Q03435    203   NHP10_YEAST Non-histone protein 10 OS=Sacchar...870.00005     46.6     28     55GO:0031011; C:Ino80 complex; IDA:SGD.
GO:0045027; F:DNA end binding; IDA:SGD.::GO:0000404; F:loop DNA binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0006302; P:double-strand break repair; IMP:SGD.::GO:0042766; P:nucleosome mobilization; IDA:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
9Q7S045    103   NHP6_NEUCR Non-histone chromosomal protein 6 ...860.00005     44.7     27     57GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
10Q9DC33    346   HM20A_MOUSE High mobility group protein 20A O...850.00007     47     35     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
11Q9NP66    347   HM20A_HUMAN High mobility group protein 20A O...850.00007     47     35     53GO:0005634; C:nucleus; NAS:UniProtKB.
GO:0003677; F:DNA binding; NAS:UniProtKB.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; NAS:UniProtKB.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
12Q6CC79    103   NHP6_YARLI Non-histone chromosomal protein 6 ...770.0001     43.9     29     56GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
13Q5ZKF4    348   HM20A_CHICK High mobility group protein 20A O...850.0001     46.2     35     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
14P25980    701   UBF1B_XENLA Nucleolar transcription factor 1-...1000.0001     46.6     34     58GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0045943; P:positive regulation of transcription from RNA polymerase I promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
15Q6CVH3    93   NHP6_KLULA Non-histone chromosomal protein 6 ...950.0001     43.5     28     57GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
16P33417    597   IXR1_YEAST Intrastrand cross-link recognition...950.0002     45.8     27     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003684; F:damaged DNA binding; IDA:SGD.::GO:0043565; F:sequence-specific DNA binding; IDA:SGD.
GO:0071456; P:cellular response to hypoxia; IMP:SGD.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
17Q6AZF8    345   HM20A_XENLA High mobility group protein 20A O...840.0003     45.1     33     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
18Q6DIJ5    345   HM20A_XENTR High mobility group protein 20A O...840.0003     44.7     33     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
19Q75B82    94   NHP6_ASHGO Non-histone chromosomal protein 6 ...770.0005     42     29     56GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
20Q24537    393   HMG2_DROME High mobility group protein DSP1 O...743     32.7     27     51GO:0005634; C:nucleus; NAS:UniProtKB.::GO:0005700; C:polytene chromosome; IDA:FlyBase.
GO:0008301; F:DNA binding, bending; IDA:FlyBase.::GO:0003697; F:single-stranded DNA binding; NAS:UniProtKB.::GO:0017025; F:TBP-class protein binding; IPI:FlyBase.
GO:0006338; P:chromatin remodeling; IMP:FlyBase.::GO:0006268; P:DNA unwinding involved in replication; NAS:UniProtKB.::GO:0035218; P:leg disc development; IMP:FlyBase.::GO:0008348; P:negative regulation of antimicrobial humoral response; IMP:FlyBase.::GO:0017055; P:negative regulation of RNA polymerase II transcriptional preinitiation complex assembly; IDA:FlyBase.::GO:0043388; P:positive regulation of DNA binding; IDA:FlyBase.::GO:0007379; P:segment specification; IMP:FlyBase.
21P40626    143   HMGB_TETTH High mobility group protein B OS=T...820.0006     42.4     33     56GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
22Q9T012    446   HMG13_ARATH High mobility group B protein 13 ...820.0007     43.9     32     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
23O54879    200   HMGB3_MOUSE High mobility group protein B3 OS...640.73     33.9     28     53GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:MGI.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0045578; P:negative regulation of B cell differentiation; IDA:MGI.::GO:0045638; P:negative regulation of myeloid cell differentiation; IDA:MGI.
24Q04678    706   SSRP1_CHICK FACT complex subunit SSRP1 OS=Gal...680.0008     43.9     31     60GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
25P07746    204   HMGT_ONCMY High mobility group-T protein OS=O...740.21     35.8     26     55GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
26Q08945    709   SSRP1_HUMAN FACT complex subunit SSRP1 OS=Hom...860.001     43.9     27     56GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0003677; F:DNA binding; TAS:ProtInc.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0050434; P:positive regulation of viral transcription; TAS:Reactome.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
27Q4H2R2    704   SSRP1_CIOIN FACT complex subunit SSRP1 OS=Cio...770.001     43.5     36     60GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
28Q4PBZ9    99   NHP6_USTMA Non-histone chromosomal protein 6 ...610.001     40.8     38     61GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
29Q08943    708   SSRP1_MOUSE FACT complex subunit SSRP1 OS=Mus...850.001     43.1     27     59GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
30Q04931    709   SSRP1_RAT FACT complex subunit SSRP1 OS=Rattu...840.002     42.7     27     58GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; NAS:RGD.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
31Q32L31    200   HMGB3_BOVIN High mobility group protein B3 OS...640.75     33.9     28     53GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008301; F:DNA binding, bending; IDA:UniProtKB.::GO:0003690; F:double-stranded DNA binding; IDA:UniProtKB.
GO:0006310; P:DNA recombination; IDA:UniProtKB.
records
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