Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR174W
Length:
246
Number of sequences:
5887
Description:
YDR174W HMO1 SGDID:S000002581, Chr IV from 812110-812850, Genome Release 64-1-1, Verified ORF, "Chromatin associated high mobility group (HMG) family member involved in genome maintenance; rDNA-binding component of the Pol I transcription system; associates with a 5'-3' DNA helicase and Fpr1p, a prolyl isomerase"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q32L31    200   HMGB3_BOVIN High mobility group protein B3 OS...640.75     33.9     28     53GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008301; F:DNA binding, bending; IDA:UniProtKB.::GO:0003690; F:double-stranded DNA binding; IDA:UniProtKB.
GO:0006310; P:DNA recombination; IDA:UniProtKB.
32P40632    97   NHP1_BABBO High mobility group protein homolo...880.002     40     31     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
33P17480    764   UBF1_HUMAN Nucleolar transcription factor 1 O...560.005     41.6     36     68GO:0005730; C:nucleolus; ISS:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0045943; P:positive regulation of transcription from RNA polymerase I promoter; ISS:UniProtKB.::GO:0006363; P:termination of RNA polymerase I transcription; TAS:Reactome.::GO:0006362; P:transcription elongation from RNA polymerase I promoter; TAS:Reactome.::GO:0006361; P:transcription initiation from RNA polymerase I promoter; TAS:Reactome.
34P25976    765   UBF1_MOUSE Nucleolar transcription factor 1 O...560.011     40.4     34     68GO:0005730; C:nucleolus; IDA:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0045943; P:positive regulation of transcription from RNA polymerase I promoter; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
35P25977    764   UBF1_RAT Nucleolar transcription factor 1 OS=...560.005     41.6     36     68GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0045943; P:positive regulation of transcription from RNA polymerase I promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
36P40618    202   HMGB3_CHICK High mobility group protein B3 OS...640.9     33.9     28     53GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
37P36194    201   HMGB1_CHICK High mobility group protein B1 OS...640.21     35.8     31     55GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
38Q4IQX3    101   NHP6_GIBZE Non-histone chromosomal protein 6 ...820.007     38.5     23     57GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
39P0CO24    116   NHP6_CRYNJ Non-histone chromosomal protein 6 ...840.009     38.5     30     57GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
40P0CO25    116   NHP6_CRYNB Non-histone chromosomal protein 6 ...840.009     38.5     30     57GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
41O15347    200   HMGB3_HUMAN High mobility group protein B3 OS...640.65     34.3     28     53GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008301; F:DNA binding, bending; ISS:UniProtKB.::GO:0003690; F:double-stranded DNA binding; ISS:UniProtKB.
GO:0006310; P:DNA recombination; ISS:UniProtKB.::GO:0007275; P:multicellular organismal development; TAS:ProtInc.
42P25979    677   UBF1A_XENLA Nucleolar transcription factor 1-...1000.01     40.4     32     56GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0045943; P:positive regulation of transcription from RNA polymerase I promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
43Q00059    246   TFAM_HUMAN Transcription factor A, mitochondr...770.011     39.7     31     62GO:0042645; C:mitochondrial nucleoid; IDA:BHF-UCL.
GO:0003682; F:chromatin binding; IDA:UniProtKB.::GO:0070363; F:mitochondrial light strand promoter sense binding; IDA:UniProtKB.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc.
GO:0006261; P:DNA-dependent DNA replication; TAS:ProtInc.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0006356; P:regulation of transcription from RNA polymerase I promoter; TAS:ProtInc.::GO:0006391; P:transcription initiation from mitochondrial promoter; IDA:UniProtKB.
44P40620    149   HMGL_VICFA HMG1/2-like protein OS=Vicia faba ...800.013     38.9     29     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
45Q10241    223   CMB1_SCHPO Mismatch-binding protein cmb1 OS=S...620.014     39.3     40     60GO:0005739; C:mitochondrion; IDA:PomBase.::GO:0005634; C:nucleus; NAS:PomBase.
GO:0003684; F:damaged DNA binding; IDA:PomBase.
GO:0006281; P:DNA repair; TAS:PomBase.
46O49596    144   HMGB2_ARATH High mobility group B protein 2 O...1050.015     38.5     30     44GO:0000785; C:chromatin; TAS:TAIR.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0003682; F:chromatin binding; TAS:TAIR.::GO:0003677; F:DNA binding; IDA:TAIR.::GO:0030527; F:structural constituent of chromatin; TAS:TAIR.
GO:0006333; P:chromatin assembly or disassembly; TAS:TAIR.
47Q6BRB4    92   NHP6_DEBHA Non-histone chromosomal protein 6 ...850.015     37.4     27     56GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
48Q91ZW1    244   TFAM_RAT Transcription factor A, mitochondria...1300.018     39.3     25     48GO:0042645; C:mitochondrial nucleoid; ISS:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0031072; F:heat shock protein binding; IPI:RGD.::GO:0070363; F:mitochondrial light strand promoter sense binding; ISS:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IMP:RGD.
GO:0006264; P:mitochondrial DNA replication; TAS:RGD.::GO:0045893; P:positive regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0006391; P:transcription initiation from mitochondrial promoter; ISS:UniProtKB.
49Q9W602    693   SSRP1_XENLA FACT complex subunit SSRP1 OS=Xen...780.018     39.7     23     58GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
50P11873    100   HMGC_TETTH High mobility group protein C OS=T...780.019     37.4     27     56GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
51Q9UVL1    92   NHP6_CANAL Non-histone chromosomal protein 6 ...830.021     37     28     57GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IDA:CGD.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
52P40625    99   HMG_TETPY High mobility group protein OS=Tetr...580.022     37     31     60GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
53P27347    157   MNB1B_MAIZE DNA-binding protein MNB1B OS=Zea ...930.025     38.1     28     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
54P11632    93   NHP6A_YEAST Non-histone chromosomal protein 6...860.027     37     27     52GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:SGD.
GO:0008301; F:DNA binding, bending; IDA:SGD.::GO:0031491; F:nucleosome binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0043565; F:sequence-specific DNA binding; IDA:SGD.
GO:0034724; P:DNA replication-independent nucleosome organization; IDA:SGD.::GO:0006298; P:mismatch repair; IC:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0051123; P:RNA polymerase II transcriptional preinitiation complex assembly; IDA:SGD.::GO:0070898; P:RNA polymerase III transcriptional preinitiation complex assembly; IDA:SGD.
55P26586    271   HMGL_TRYBR High mobility group protein homolo...1070.4     35     28     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
56P93047    141   HMGB3_ARATH High mobility group B protein 3 O...880.031     37.4     32     47GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
57P63159    215   HMGB1_RAT High mobility group protein B1 OS=R...740.12     36.6     27     54GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IDA:RGD.::GO:0005615; C:extracellular space; IDA:RGD.::GO:0005634; C:nucleus; IDA:RGD.
GO:0008097; F:5S rRNA binding; IDA:RGD.::GO:0003681; F:bent DNA binding; IDA:MGI.::GO:0000402; F:crossed form four-way junction DNA binding; IDA:MGI.::GO:0005125; F:cytokine activity; IDA:UniProtKB.::GO:0008301; F:DNA binding, bending; IDA:RGD.::GO:0003690; F:double-stranded DNA binding; IDA:RGD.::GO:0051861; F:glycolipid binding; IDA:RGD.::GO:0008201; F:heparin binding; IDA:RGD.::GO:0000401; F:open form four-way junction DNA binding; IDA:MGI.::GO:0042277; F:peptide binding; IDA:RGD.::GO:0046983; F:protein dimerization activity; IDA:RGD.::GO:0050786; F:RAGE receptor binding; IPI:UniProtKB.::GO:0003697; F:single-stranded DNA binding; IDA:RGD.::GO:0008134; F:transcription factor binding; IDA:RGD.
GO:0031532; P:actin cytoskeleton reorganization; IMP:RGD.::GO:0000902; P:cell morphogenesis; IMP:RGD.::GO:0071347; P:cellular response to interleukin-1; IEP:RGD.::GO:0006935; P:chemotaxis; IDA:RGD.::GO:0007623; P:circadian rhythm; IEP:RGD.::GO:0032392; P:DNA geometric change; IDA:MGI.::GO:0050930; P:induction of positive chemotaxis; IDA:MGI.::GO:0050831; P:male-specific defense response to bacterium; IDA:RGD.::GO:0051450; P:myoblast proliferation; IMP:RGD.::GO:0008156; P:negative regulation of DNA replication; IDA:RGD.::GO:0031175; P:neuron projection development; IGI:UniProtKB.::GO:0002053; P:positive regulation of mesenchymal cell proliferation; IDA:MGI.::GO:0045931; P:positive regulation of mitotic cell cycle; IDA:MGI.::GO:0033034; P:positive regulation of myeloid cell apoptotic process; IDA:RGD.::GO:0045663; P:positive regulation of myoblast differentiation; IMP:RGD.::GO:0010976; P:positive regulation of neuron projection development; IMP:RGD.::GO:0014911; P:positive regulation of smooth muscle cell migration; IMP:RGD.::GO:0050727; P:regulation of inflammatory response; IDA:RGD.::GO:0042493; P:response to drug; IEP:RGD.::GO:0009749; P:response to glucose stimulus; IEP:RGD.::GO:0009408; P:response to heat; IEP:RGD.::GO:0032868; P:response to insulin stimulus; IEP:RGD.::GO:0034341; P:response to interferon-gamma; IMP:RGD.::GO:0032496; P:response to lipopolysaccharide; IEP:RGD.
58A9RA84    215   HMGB1_PAPAN High mobility group protein B1 OS...740.12     36.6     27     54GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
59P63158    215   HMGB1_MOUSE High mobility group protein B1 OS...740.12     36.6     27     54GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005615; C:extracellular space; IDA:MGI.::GO:0043005; C:neuron projection; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI.::GO:0005625; C:soluble fraction; IDA:MGI.
GO:0010858; F:calcium-dependent protein kinase regulator activity; IDA:MGI.::GO:0005125; F:cytokine activity; IDA:MGI.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008201; F:heparin binding; IEA:UniProtKB-KW.::GO:0001786; F:phosphatidylserine binding; TAS:BHF-UCL.::GO:0030295; F:protein kinase activator activity; IDA:MGI.
GO:0001654; P:eye development; IMP:MGI.::GO:0006954; P:inflammatory response; TAS:BHF-UCL.::GO:0030324; P:lung development; IMP:MGI.::GO:2000426; P:negative regulation of apoptotic cell clearance; IDA:BHF-UCL.::GO:0045819; P:positive regulation of glycogen catabolic process; IMP:MGI.::GO:0045639; P:positive regulation of myeloid cell differentiation; IDA:MGI.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:MGI.::GO:0051384; P:response to glucocorticoid stimulus; IMP:MGI.
60Q4R844    215   HMGB1_MACFA High mobility group protein B1 OS...740.12     36.6     27     54GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
61P09429    215   HMGB1_HUMAN High mobility group protein B1 OS...740.12     36.6     27     54GO:0009986; C:cell surface; IDA:UniProtKB.::GO:0000793; C:condensed chromosome; IDA:UniProtKB.::GO:0005615; C:extracellular space; IDA:UniProtKB.::GO:0005730; C:nucleolus; IDA:HPA.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0042056; F:chemoattractant activity; ISS:UniProtKB.::GO:0005125; F:cytokine activity; ISS:UniProtKB.::GO:0003684; F:damaged DNA binding; ISS:UniProtKB.::GO:0008301; F:DNA binding, bending; IMP:UniProtKB.::GO:0003690; F:double-stranded DNA binding; ISS:UniProtKB.::GO:0050786; F:RAGE receptor binding; ISS:UniProtKB.::GO:0070491; F:repressing transcription factor binding; IPI:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:UniProtKB.::GO:0003697; F:single-stranded DNA binding; ISS:UniProtKB.
GO:0006288; P:base-excision repair, DNA ligation; IDA:UniProtKB.::GO:0002407; P:dendritic cell chemotaxis; ISS:UniProtKB.::GO:0006309; P:DNA fragmentation involved in apoptotic nuclear change; TAS:Reactome.::GO:0006265; P:DNA topological change; ISS:UniProtKB.::GO:0002437; P:inflammatory response to antigenic stimulus; IEP:UniProtKB.::GO:0045087; P:innate immune response; TAS:Reactome.::GO:0001773; P:myeloid dendritic cell activation; ISS:UniProtKB.::GO:0017055; P:negative regulation of RNA polymerase II transcriptional preinitiation complex assembly; IDA:UniProtKB.::GO:0031175; P:neuron projection development; ISS:UniProtKB.::GO:0043065; P:positive regulation of apoptotic process; IDA:UniProtKB.::GO:0043280; P:positive regulation of cysteine-type endopeptidase activity involved in apoptotic process; IDA:UniProtKB.::GO:0043388; P:positive regulation of DNA binding; IDA:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0033151; P:V(D)J recombination; IDA:UniProtKB.
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