Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR151C
Length:
325
Number of sequences:
5887
Description:
YDR151C CTH1 SGDID:S000002558, Chr IV from 765155-764178, Genome Release 64-1-1, reverse complement, Verified ORF, "Member of the CCCH zinc finger family; has similarity to mammalian Tis11 protein, which activates transcription and also has a role in mRNA degradation; may function with Tis11p in iron homeostasis"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
91Q69NK8    613   C3H59_ORYSJ Zinc finger CCCH domain-containin...960.32     36.6     28     42
GO:0003824; F:catalytic activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
92Q657B3    698   C3H7_ORYSJ Zinc finger CCCH domain-containing...720.33     36.6     28     39
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
93Q9STM4    448   C3H43_ARATH Zinc finger CCCH domain-containin...682.1     33.9     34     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
94Q5TC82    1133   RC3H1_HUMAN Roquin OS=Homo sapiens (Human). G...350.33     36.6     46     54GO:0000932; C:cytoplasmic mRNA processing body; ISS:BHF-UCL.::GO:0010494; C:cytoplasmic stress granule; ISS:BHF-UCL.
GO:0003730; F:mRNA 3'-UTR binding; ISS:BHF-UCL.::GO:0004842; F:ubiquitin-protein ligase activity; TAS:BHF-UCL.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0033962; P:cytoplasmic mRNA processing body assembly; ISS:BHF-UCL.::GO:0046007; P:negative regulation of activated T cell proliferation; ISS:BHF-UCL.::GO:0030889; P:negative regulation of B cell proliferation; ISS:BHF-UCL.::GO:0002635; P:negative regulation of germinal center formation; ISS:BHF-UCL.::GO:0045623; P:negative regulation of T-helper cell differentiation; ISS:BHF-UCL.::GO:0000956; P:nuclear-transcribed mRNA catabolic process; ISS:BHF-UCL.::GO:0043488; P:regulation of mRNA stability; ISS:BHF-UCL.::GO:0050856; P:regulation of T cell receptor signaling pathway; ISS:BHF-UCL.
95Q4VGL6    1130   RC3H1_MOUSE Roquin OS=Mus musculus (Mouse). G...350.34     36.6     46     54GO:0000932; C:cytoplasmic mRNA processing body; IDA:BHF-UCL.::GO:0010494; C:cytoplasmic stress granule; IDA:BHF-UCL.
GO:0003730; F:mRNA 3'-UTR binding; IDA:BHF-UCL.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0033962; P:cytoplasmic mRNA processing body assembly; IMP:BHF-UCL.::GO:0046007; P:negative regulation of activated T cell proliferation; IMP:BHF-UCL.::GO:0030889; P:negative regulation of B cell proliferation; IMP:BHF-UCL.::GO:0002635; P:negative regulation of germinal center formation; IMP:BHF-UCL.::GO:0045623; P:negative regulation of T-helper cell differentiation; IMP:MGI.::GO:0000956; P:nuclear-transcribed mRNA catabolic process; IMP:BHF-UCL.::GO:0043488; P:regulation of mRNA stability; IMP:BHF-UCL.::GO:0050856; P:regulation of T cell receptor signaling pathway; IMP:BHF-UCL.
96A9LNK9    631   CPSF_ARATH Cleavage and polyadenylation speci...790.34     36.2     24     44GO:0005634; C:nucleus; IDA:TAIR.
GO:0005516; F:calmodulin binding; IDA:TAIR.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IDA:TAIR.::GO:0003723; F:RNA binding; IDA:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
97Q6NUC6    1114   RC3H1_XENLA Roquin OS=Xenopus laevis (African...350.37     36.2     46     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
98A6QYC6    741   DUS3_AJECN tRNA-dihydrouridine(47) synthase [...980.42     36.2     28     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0017150; F:tRNA dihydrouridine synthase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
99Q0CZL3    719   DUS3_ASPTN tRNA-dihydrouridine(47) synthase [...510.53     35.8     33     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0017150; F:tRNA dihydrouridine synthase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
100Q2QPW2    619   C3H67_ORYSJ Zinc finger CCCH domain-containin...720.55     35.8     29     42
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
101P0CS64    332   YTH1_CRYNJ mRNA 3'-end-processing protein YTH...710.58     35.4     31     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
102P0CS65    332   YTH1_CRYNB mRNA 3'-end-processing protein YTH...710.58     35.4     31     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
103Q5BF62    714   DUS3_EMENI tRNA-dihydrouridine(47) synthase [...490.6     35.8     35     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0017150; F:tRNA dihydrouridine synthase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
104Q6FJ14    640   DUS3_CANGA tRNA-dihydrouridine(47) synthase [...490.6     35.4     35     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0017150; F:tRNA dihydrouridine synthase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
105Q9P6R8    533   CWC24_SCHPO Pre-mRNA-splicing factor cwf24 OS...590.64     35.4     25     51GO:0005681; C:spliceosomal complex; IDA:PomBase.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008080; F:N-acetyltransferase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; TAS:PomBase.::GO:0016074; P:snoRNA metabolic process; NAS:PomBase.
106Q6ZPZ3    1304   ZC3H4_MOUSE Zinc finger CCCH domain-containin...610.65     35.8     28     49
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
107Q9UPT8    1303   ZC3H4_HUMAN Zinc finger CCCH domain-containin...610.69     35.4     28     49
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
108Q5ZDJ6    462   C3H8_ORYSJ Zinc finger CCCH domain-containing...940.79     35     29     41
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
109Q9LTS7    675   C3H65_ARATH Zinc finger CCCH domain-containin...700.73     35.4     30     44
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
110Q2R4J4    444   C3H63_ORYSJ Zinc finger CCCH domain-containin...690.74     35     29     42
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
111Q0DA50    665   C3H45_ORYSJ Zinc finger CCCH domain-containin...790.78     35.4     25     41
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
112Q9ERV1    416   MKRN2_MOUSE Probable E3 ubiquitin-protein lig...550.78     35     33     53GO:0005622; C:intracellular; ISS:UniProtKB.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
113Q8L7N8    375   C3H57_ARATH Zinc finger CCCH domain-containin...669.5     31.6     27     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; TAS:TAIR.::GO:0004518; F:nuclease activity; TAS:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
114P93755    716   C3H30_ARATH Zinc finger CCCH domain-containin...660.91     35     33     44
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; TAS:TAIR.
115Q10M00    688   C3H22_ORYSJ Zinc finger CCCH domain-containin...550.95     35     33     53
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
116Q9SQU4    462   C3H34_ARATH Zinc finger CCCH domain-containin...695.4     32.3     28     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
117P41000    583   CPS3_SCHPO Protein cps3 OS=Schizosaccharomyce...1560.99     35     26     41GO:0005829; C:cytosol; IDA:PomBase.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0000226; P:microtubule cytoskeleton organization; IMP:PomBase.::GO:0007346; P:regulation of mitotic cell cycle; IMP:PomBase.
118Q59T36    215   YTH1_CANAL mRNA 3'-end-processing protein YTH...671     34.3     28     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0042493; P:response to drug; IMP:CGD.
119Q9H000    416   MKRN2_HUMAN Probable E3 ubiquitin-protein lig...551.1     34.7     33     53GO:0005622; C:intracellular; IDA:UniProtKB.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
120Q5ACW2    216   CWC24_CANAL Pre-mRNA-splicing factor CWC24 OS...311.1     34.3     39     65GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
121Q5JLB5    439   C3H12_ORYSJ Zinc finger CCCH domain-containin...698     32     26     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
records
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