Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR151C
Length:
325
Number of sequences:
5887
Description:
YDR151C CTH1 SGDID:S000002558, Chr IV from 765155-764178, Genome Release 64-1-1, reverse complement, Verified ORF, "Member of the CCCH zinc finger family; has similarity to mammalian Tis11 protein, which activates transcription and also has a role in mRNA degradation; may function with Tis11p in iron homeostasis"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61O82307    315   C3H23_ARATH Zinc finger CCCH domain-containin...960.041     38.9     29     42GO:0005737; C:cytoplasm; IDA:TAIR.
GO:0003677; F:DNA binding; IDA:TAIR.::GO:0003723; F:RNA binding; IDA:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; TAS:TAIR.
62Q8IXZ2    948   ZC3H3_HUMAN Zinc finger CCCH domain-containin...660.043     39.3     32     44GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006378; P:mRNA polyadenylation; IMP:UniProtKB.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:UniProtKB.::GO:0010793; P:regulation of mRNA export from nucleus; IMP:UniProtKB.
63Q5FWH2    727   UNKL_MOUSE Putative E3 ubiquitin-protein liga...490.044     39.3     35     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
64P0C090    1187   RC3H2_MOUSE RING finger and CCCH-type zinc fi...560.046     39.3     39     48GO:0012505; C:endomembrane system; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-KW.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
65Q9LXV4    706   C3H56_ARATH Zinc finger CCCH domain-containin...730.052     38.9     32     47GO:0005737; C:cytoplasm; IDA:TAIR.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; TAS:TAIR.
66O17917    384   RN113_CAEEL RING finger protein 113 homolog O...490.053     38.9     27     59
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0007281; P:germ cell development; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0042127; P:regulation of cell proliferation; IMP:WormBase.::GO:0040020; P:regulation of meiosis; IMP:WormBase.
67Q7XT07    685   DUS3L_ORYSJ tRNA-dihydrouridine(47) synthase ...550.068     38.5     38     56
GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0017150; F:tRNA dihydrouridine synthase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
68Q8BL48    810   UNK_MOUSE RING finger protein unkempt homolog...692.7     33.5     29     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
69O15541    343   R113A_HUMAN RING finger protein 113A OS=Homo ...490.085     38.1     27     61
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
70A1D1U0    726   DUS3_NEOFI tRNA-dihydrouridine(47) synthase [...470.11     38.1     36     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0017150; F:tRNA dihydrouridine synthase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
71Q4WRX4    726   DUS3_ASPFU tRNA-dihydrouridine(47) synthase [...470.11     38.1     36     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0017150; F:tRNA dihydrouridine synthase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
72Q67ER4    343   R113A_BOVIN RING finger protein 113A OS=Bos t...490.12     37.4     27     61
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
73Q9H9P5    680   UNKL_HUMAN Putative E3 ubiquitin-protein liga...490.13     37.7     35     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
74Q5RJC5    435   C3H67_ARATH Zinc finger CCCH domain-containin...662.1     33.9     29     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
75Q9C0B0    810   UNK_HUMAN RING finger protein unkempt homolog...693.2     33.5     29     42
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
76Q6EE22    810   UNK_CANFA RING finger protein unkempt homolog...693.3     33.1     29     42
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
77Q06053    668   DUS3_YEAST tRNA-dihydrouridine(47) synthase [...510.16     37.4     37     53GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0017150; F:tRNA dihydrouridine synthase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006400; P:tRNA modification; IMP:SGD.
78A7A1S5    668   DUS3_YEAS7 tRNA-dihydrouridine(47) synthase [...510.16     37.4     37     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0017150; F:tRNA dihydrouridine synthase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
79Q8IZP6    322   R113B_HUMAN RING finger protein 113B OS=Homo ...500.21     36.6     26     58
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
80Q8GXX7    397   C3H33_ARATH Zinc finger CCCH domain-containin...690.22     37     30     43GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; TAS:TAIR.::GO:0048027; F:mRNA 5'-UTR binding; IPI:TAIR.::GO:0004518; F:nuclease activity; TAS:TAIR.::GO:0010313; F:phytochrome binding; IPI:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0017148; P:negative regulation of translation; IMP:TAIR.
81Q941Q3    524   C3H37_ARATH Zinc finger CCCH domain-containin...792.7     33.5     27     38GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IDA:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0001709; P:cell fate determination; TAS:TAIR.::GO:0009908; P:flower development; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
82Q8GW05    388   C3H47_ORYSJ Zinc finger CCCH domain-containin...710.22     36.6     30     45
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
83Q9HBD1    1191   RC3H2_HUMAN RING finger and CCCH-type zinc fi...560.23     37     38     48GO:0009986; C:cell surface; IDA:UniProtKB.::GO:0012505; C:endomembrane system; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-KW.::GO:0005624; C:membrane fraction; IDA:UniProtKB.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
84Q5NAV3    466   C3H5_ORYSJ Zinc finger CCCH domain-containing...542     33.9     28     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
85Q6FXX1    226   CWC24_CANGA Pre-mRNA-splicing factor CWC24 OS...330.25     36.2     36     64GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
86Q10EL1    764   C3H24_ORYSJ Zinc finger CCCH domain-containin...720.27     36.6     32     44
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
87Q6CSS6    229   CWC24_KLULA Pre-mRNA-splicing factor CWC24 OS...350.27     36.2     37     63GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
88Q6BYU0    232   CWC24_DEBHA Pre-mRNA-splicing factor CWC24 OS...510.29     35.8     33     57GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
89Q84W91    468   C3H32_ARATH Zinc finger CCCH domain-containin...1123.4     33.1     21     38GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
90Q0DBW8    279   C3H42_ORYSJ Zinc finger CCCH domain-containin...680.3     36.2     26     49
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
91Q69NK8    613   C3H59_ORYSJ Zinc finger CCCH domain-containin...960.32     36.6     28     42
GO:0003824; F:catalytic activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
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