Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR139C
Length:
77
Number of sequences:
5887
Description:
YDR139C RUB1 SGDID:S000002546, Chr IV from 733702-733618,733924-733776, Genome Release 64-1-1, reverse complement, Verified ORF, "Ubiquitin-like protein with similarity to mammalian NEDD8; conjugation (neddylation) substrates include the cullins Cdc53p, Rtt101p, and Cul3p; activated by Ula1p and Uba3p (E1 enzyme pair); conjugation mediated by Ubc12p (E2 enzyme)"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
91P0CG70    305   UBI4P_NEUCR Polyubiquitin OS=1257 / FGSC 987)...762e-19     83.2     53     78GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
92P0CG83    171   UBIQP_HORVU Polyubiquitin OS=Hordeum vulgare ...762e-19     81.6     53     75GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
93Q71UE8    81   NEDD8_RAT NEDD8 OS=Rattus norvegicus (Rat). G...683e-19     79.3     56     76GO:0005634; C:nucleus; IDA:RGD.
GO:0045116; P:protein neddylation; IDA:RGD.::GO:0014070; P:response to organic cyclic compound; IDA:RGD.
94P29595    81   NEDD8_MOUSE NEDD8 OS=Mus musculus (Mouse). GN...683e-19     79.3     56     76GO:0005634; C:nucleus; IDA:MGI.
GO:0008104; P:protein localization; IDA:MGI.::GO:0045116; P:protein neddylation; ISS:MGI.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IDA:MGI.
95P0CG74    305   UBI4P_CANAX Polyubiquitin OS=Candida albicans...764e-19     82.4     53     76GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
96P0CG60    229   UBB_PONPY Polyubiquitin-B OS=Pongo pygmaeus (...764e-19     82     53     76GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
97P0CG65    229   UBB_PANTR Polyubiquitin-B OS=Pan troglodytes ...764e-19     82     53     76GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
98P0CG47    229   UBB_HUMAN Polyubiquitin-B OS=Homo sapiens (Hu...764e-19     82     53     76GO:0005829; C:cytosol; TAS:Reactome.::GO:0030666; C:endocytic vesicle membrane; TAS:Reactome.::GO:0010008; C:endosome membrane; TAS:Reactome.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005886; C:plasma membrane; TAS:Reactome.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000187; P:activation of MAPK activity; TAS:Reactome.::GO:0031145; P:anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process; TAS:Reactome.::GO:0006916; P:anti-apoptosis; TAS:Reactome.::GO:0002479; P:antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent; TAS:Reactome.::GO:0006915; P:apoptotic process; TAS:Reactome.::GO:0016044; P:cellular membrane organization; TAS:Reactome.::GO:0019221; P:cytokine-mediated signaling pathway; TAS:Reactome.::GO:0006977; P:DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest; TAS:Reactome.::GO:0006281; P:DNA repair; TAS:Reactome.::GO:0046788; P:egress of virus within host cell; TAS:Reactome.::GO:0016197; P:endosome transport; TAS:Reactome.::GO:0007173; P:epidermal growth factor receptor signaling pathway; TAS:Reactome.::GO:0008543; P:fibroblast growth factor receptor signaling pathway; TAS:Reactome.::GO:0000080; P:G1 phase of mitotic cell cycle; TAS:Reactome.::GO:0000082; P:G1/S transition of mitotic cell cycle; TAS:Reactome.::GO:0010467; P:gene expression; TAS:Reactome.::GO:0007249; P:I-kappaB kinase/NF-kappaB cascade; TAS:Reactome.::GO:0008624; P:induction of apoptosis by extracellular signals; TAS:Reactome.::GO:0045087; P:innate immune response; TAS:Reactome.::GO:0007254; P:JNK cascade; TAS:Reactome.::GO:0000216; P:M/G1 transition of mitotic cell cycle; TAS:Reactome.::GO:0016071; P:mRNA metabolic process; TAS:Reactome.::GO:0002755; P:MyD88-dependent toll-like receptor signaling pathway; TAS:Reactome.::GO:0042059; P:negative regulation of epidermal growth factor receptor signaling pathway; TAS:Reactome.::GO:0032480; P:negative regulation of type I interferon production; TAS:Reactome.::GO:0051436; P:negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.::GO:0048011; P:nerve growth factor receptor signaling pathway; TAS:Reactome.::GO:0007220; P:Notch receptor processing; TAS:Reactome.::GO:0007219; P:Notch signaling pathway; TAS:Reactome.::GO:0070423; P:nucleotide-binding oligomerization domain containing signaling pathway; TAS:Reactome.::GO:0043123; P:positive regulation of I-kappaB kinase/NF-kappaB cascade; TAS:Reactome.::GO:0051092; P:positive regulation of NF-kappaB transcription factor activity; TAS:Reactome.::GO:0051437; P:positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.::GO:0000209; P:protein polyubiquitination; TAS:Reactome.::GO:0000084; P:S phase of mitotic cell cycle; TAS:Reactome.::GO:0050852; P:T cell receptor signaling pathway; TAS:Reactome.::GO:0008063; P:Toll signaling pathway; TAS:Reactome.::GO:0034130; P:toll-like receptor 1 signaling pathway; TAS:Reactome.::GO:0034134; P:toll-like receptor 2 signaling pathway; TAS:Reactome.::GO:0034138; P:toll-like receptor 3 signaling pathway; TAS:Reactome.::GO:0034142; P:toll-like receptor 4 signaling pathway; TAS:Reactome.::GO:0035666; P:TRIF-dependent toll-like receptor signaling pathway; TAS:Reactome.
99P0CG67    229   UBB_GORGO Polyubiquitin-B OS=Gorilla gorilla ...764e-19     82     53     76GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
100P0CG76    381   UBIQA_DICDI Polyubiquitin-A OS=Dictyostelium ...763e-18     80.9     53     76GO:0005813; C:centrosome; IDA:dictyBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
101P0CH33    229   UBQ11_ARATH Polyubiquitin 11 OS=Arabidopsis t...764e-19     82     53     75GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
102P0CG81    381   UBIQH_DICDI Polyubiquitin-H OS=Dictyostelium ...763e-18     80.9     53     76GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
103Q1EC66    306   UBQ3_ARATH Polyubiquitin 3 OS=Arabidopsis tha...766e-19     82     53     75GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
104P0CH27    356   RL402_TRYCR Ubiquitin-60S ribosomal protein L...765e-19     82.8     53     75GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
105P0CG55    305   UBB_SHEEP Polyubiquitin-B OS=Ovis aries (Shee...761e-18     81.3     51     76GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
106Q8MKD1    305   UBB_HORSE Polyubiquitin-B OS=Equus caballus (...761e-18     80.9     51     75GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
107P0CG54    311   UBB_CAVPO Polyubiquitin-B OS=Cavia porcellus ...766e-19     82     53     76GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
108P0CG53    305   UBB_BOVIN Polyubiquitin-B OS=Bos taurus (Bovi...766e-19     82     53     76GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
109Q3E7T8    305   UBQ14_ARATH Polyubiquitin 14 OS=Arabidopsis t...766e-19     82     53     75GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
110P69325    305   UBIQP_SOYBN Polyubiquitin OS=Glycine max (Soy...766e-19     82     53     75GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
111P0CG51    305   UBB_RAT Polyubiquitin-B OS=Rattus norvegicus ...766e-19     82     53     76GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
112P0CG49    305   UBB_MOUSE Polyubiquitin-B OS=Mus musculus (Mo...766e-19     82     53     76GO:0005829; C:cytosol; TAS:Reactome.::GO:0005654; C:nucleoplasm; TAS:Reactome.
113P0CG62    305   UBB_CHICK Polyubiquitin-B OS=Gallus gallus (C...766e-19     82     53     76GO:0005829; C:cytosol; TAS:Reactome.::GO:0010008; C:endosome membrane; TAS:Reactome.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0035419; P:activation of MAPK activity involved in innate immune response; TAS:Reactome.::GO:0007250; P:activation of NF-kappaB-inducing kinase activity; TAS:Reactome.::GO:0002755; P:MyD88-dependent toll-like receptor signaling pathway; TAS:Reactome.::GO:0035681; P:toll-like receptor 15 signaling pathway; TAS:Reactome.::GO:0034134; P:toll-like receptor 2 signaling pathway; TAS:Reactome.::GO:0035682; P:toll-like receptor 21 signaling pathway; TAS:Reactome.::GO:0034138; P:toll-like receptor 3 signaling pathway; TAS:Reactome.::GO:0034142; P:toll-like receptor 4 signaling pathway; TAS:Reactome.::GO:0034146; P:toll-like receptor 5 signaling pathway; TAS:Reactome.::GO:0034154; P:toll-like receptor 7 signaling pathway; TAS:Reactome.::GO:0019985; P:translesion synthesis; TAS:Reactome.
114P69309    305   UBIQP_AVEFA Polyubiquitin OS=Avena fatua (Wil...767e-19     82     53     75GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
115P69315    305   UBIQP_LINUS Polyubiquitin OS=Linum usitatissi...360.01     36.6     47     78GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
116Q3E7K8    230   UBQ12_ARATH Polyubiquitin 12 OS=Arabidopsis t...760.000000000000004     70.9     46     68GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
117P0CG72    382   UBI4P_SCHPO Polyubiquitin OS=Schizosaccharomy...767e-19     82.4     53     76GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0031386; F:protein tag; NAS:PomBase.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IMP:PomBase.::GO:0016579; P:protein deubiquitination; NAS:PomBase.::GO:0016567; P:protein ubiquitination; NAS:PomBase.
118P0CG75    381   UBI4P_KLULA Polyubiquitin OS=1267 / NRRL Y-11...768e-19     82.4     53     76GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
119P42740    457   UBIQP_AGLNE Polyubiquitin OS=Aglaothamnion ne...767e-18     80.5     53     75GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
120P0CG78    533   UBIQF_DICDI Polyubiquitin-F OS=Dictyostelium ...767e-18     80.9     53     76GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
121P0CG77    229   UBIQD_DICDI Polyubiquitin-D OS=Dictyostelium ...769e-19     80.9     53     76GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
records
Previous ‹‹ ›› Next Total records: 262 91 - 120
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::