Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR139C
Length:
77
Number of sequences:
5887
Description:
YDR139C RUB1 SGDID:S000002546, Chr IV from 733702-733618,733924-733776, Genome Release 64-1-1, reverse complement, Verified ORF, "Ubiquitin-like protein with similarity to mammalian NEDD8; conjugation (neddylation) substrates include the cullins Cdc53p, Rtt101p, and Cul3p; activated by Ula1p and Uba3p (E1 enzyme pair); conjugation mediated by Ubc12p (E2 enzyme)"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61P33190    129   RL40_TETPY Ubiquitin-60S ribosomal protein L4...767e-20     82.4     51     76GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
62P62982    156   RS27A_RAT Ubiquitin-40S ribosomal protein S27...767e-20     82.8     53     76GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
63P62983    156   RS27A_MOUSE Ubiquitin-40S ribosomal protein S...767e-20     82.8     53     76GO:0005829; C:cytosol; TAS:Reactome.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
64P68200    156   RS27A_ICTPU Ubiquitin-40S ribosomal protein S...768e-20     82.8     53     76GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
65Q9ARZ9    155   R27AA_ORYSJ Ubiquitin-40S ribosomal protein S...768e-20     82.8     53     75GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
66P0CG63    381   UBI4P_YEAST Polyubiquitin OS=Saccharomyces ce...767e-19     82.4     53     76GO:0005737; C:cytoplasm; IC:SGD.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043008; F:ATP-dependent protein binding; TAS:SGD.
GO:0030437; P:ascospore formation; TAS:SGD.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0016579; P:protein deubiquitination; TAS:SGD.::GO:0006513; P:protein monoubiquitination; TAS:SGD.::GO:0000209; P:protein polyubiquitination; TAS:SGD.
67P15357    156   RS27A_DROME Ubiquitin-40S ribosomal protein S...768e-20     82.8     53     76GO:0005875; C:microtubule associated complex; IDA:FlyBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
68P27923    155   RS27A_MAIZE Ubiquitin-40S ribosomal protein S...768e-20     82.8     53     75GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
69P46575    129   RL40_EIMBO Ubiquitin-60S ribosomal protein L4...768e-20     82     51     76GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
70O65381    78   RUB3_ARATH NEDD8-like protein RUB3 OS=Arabido...768e-20     80.9     54     71
71P22589    229   UBIQP_PHYIN Polyubiquitin OS=Phytophthora inf...767e-19     81.3     51     78GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
72P47905    155   RS27A_LUPAL Ubiquitin-40S ribosomal protein S...768e-20     82.4     53     75GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
73P62981    156   RS27A_SOLTU Ubiquitin-40S ribosomal protein S...769e-20     82.4     53     75GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
74P62980    156   RS27A_SOLLC Ubiquitin-40S ribosomal protein S...769e-20     82.4     53     75GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
75P68203    156   RS27A_SPOFR Ubiquitin-40S ribosomal protein S...761e-19     82.4     53     76GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
76P68202    155   RS27A_PLUXY Ubiquitin-40S ribosomal protein S...761e-19     82.4     53     76GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
77P29504    155   RS27A_MANSE Ubiquitin-40S ribosomal protein S...761e-19     82.4     53     76GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
78P59232    157   R27AB_ARATH Ubiquitin-40S ribosomal protein S...761e-19     82.4     53     75GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
79P59233    157   R27AC_ARATH Ubiquitin-40S ribosomal protein S...761e-19     82.4     53     75GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
80P23398    133   UBIQP_STRPU Polyubiquitin OS=Strongylocentrot...560.000000000001     63.2     52     75GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
81P42739    423   UBIQP_ACECL Polyubiquitin OS=Acetabularia cli...410.0000001     51.6     59     73GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
82P14794    128   RL40_DICDI Ubiquitin-60S ribosomal protein L4...761e-19     81.6     53     76GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
83P69201    128   RL40_LEIMA Ubiquitin-60S ribosomal protein L4...761e-19     81.3     51     76GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
84P59271    156   R27AA_ARATH Ubiquitin-40S ribosomal protein S...762e-19     82     53     75GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
85Q9FHQ6    322   UBQ9_ARATH Polyubiquitin 9 OS=Arabidopsis tha...760.0000000000006     65.9     45     64GO:0005618; C:cell wall; IDA:TAIR.::GO:0005730; C:nucleolus; IDA:TAIR.::GO:0005774; C:vacuolar membrane; IDA:TAIR.
86P0CG88    305   UBIQJ_DICDI Polyubiquitin-J OS=Dictyostelium ...761e-18     80.9     53     76GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
87P0CG80    305   UBIQI_DICDI Polyubiquitin-I OS=Dictyostelium ...761e-18     80.9     53     76GO:0005813; C:centrosome; IDA:dictyBase.::GO:0005615; C:extracellular space; IDA:dictyBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
88P21899    128   RL40_TRYBB Ubiquitin-60S ribosomal protein L4...762e-19     81.3     51     75GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
89P62972    167   UBIQP_XENLA Polyubiquitin OS=Xenopus laevis (...762e-19     81.6     53     76GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
90P0CG73    229   UBI1P_CANAX Polyubiquitin OS=Candida albicans...761e-18     80.5     51     75GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
91P0CG70    305   UBI4P_NEUCR Polyubiquitin OS=1257 / FGSC 987)...762e-19     83.2     53     78GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
records
Previous ‹‹ ›› Next Total records: 262 61 - 90
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::