Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR139C
Length:
77
Number of sequences:
5887
Description:
YDR139C RUB1 SGDID:S000002546, Chr IV from 733702-733618,733924-733776, Genome Release 64-1-1, reverse complement, Verified ORF, "Ubiquitin-like protein with similarity to mammalian NEDD8; conjugation (neddylation) substrates include the cullins Cdc53p, Rtt101p, and Cul3p; activated by Ula1p and Uba3p (E1 enzyme pair); conjugation mediated by Ubc12p (E2 enzyme)"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
241Q8R317    582   UBQL1_MOUSE Ubiquilin-1 OS=Mus musculus (Mous...710.99     30.8     32     52GO:0005783; C:endoplasmic reticulum; ISS:HGNC.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; ISS:HGNC.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
GO:0019215; F:intermediate filament binding; NAS:UniProtKB.::GO:0019900; F:kinase binding; ISS:UniProtKB.::GO:0005102; F:receptor binding; NAS:UniProtKB.
GO:0006915; P:apoptotic process; ISS:HGNC.::GO:0031396; P:regulation of protein ubiquitination; ISS:HGNC.::GO:0001666; P:response to hypoxia; ISS:HGNC.
242P54728    416   RD23B_MOUSE UV excision repair protein RAD23 ...661     30.4     27     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.::GO:0071942; C:XPC complex; ISS:UniProtKB.
GO:0003684; F:damaged DNA binding; IEA:InterPro.
GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro.::GO:0007283; P:spermatogenesis; IMP:MGI.
243Q4KMA2    415   RD23B_RAT UV excision repair protein RAD23 ho...661.2     30.4     27     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.::GO:0071942; C:XPC complex; ISS:UniProtKB.
GO:0003684; F:damaged DNA binding; IEA:InterPro.
GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro.
244P46919    345   GPDA_BACSU Glycerol-3-phosphate dehydrogenase...581.6     30     33     52GO:0009331; C:glycerol-3-phosphate dehydrogenase complex; IEA:InterPro.
GO:0047952; F:glycerol-3-phosphate dehydrogenase [NAD(P)+ activity; IEA:EC.::GO:0004367; F:glycerol-3-phosphate dehydrogenase [NAD+ activity; IEA:InterPro.::GO:0051287; F:NAD binding; IEA:InterPro.
GO:0046168; P:glycerol-3-phosphate catabolic process; IEA:InterPro.]::GO:0008654; P:phospholipid biosynthetic process; IEA:UniProtKB-KW.]
245Q14DL0    610   UBQLN_MOUSE Ubiquilin-like protein OS=Mus mus...741.7     30     28     49
246Q9Z8R4    834   GYRA_CHLPN DNA gyrase subunit A OS=Chlamydia ...552.5     29.6     31     58GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003918; F:DNA topoisomerase (ATP-hydrolyzing) activity; IEA:EC.
GO:0006265; P:DNA topological change; IEA:InterPro.
247Q0CJ13    413   DDI1_ASPTN DNA damage-inducible protein 1 OS=...502.5     29.6     30     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:InterPro.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:InterPro.
248O57686    102   SMO1A_XENLA Small ubiquitin-related modifier ...443.9     28.1     30     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:UniProtKB.
249Q86TC9    1320   MYPN_HUMAN Myopalladin OS=Homo sapiens (Human...344     28.9     38     59GO:0015630; C:microtubule cytoskeleton; IDA:HPA.::GO:0005634; C:nucleus; ISS:BHF-UCL.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.::GO:0051371; F:muscle alpha-actinin binding; IPI:BHF-UCL.::GO:0051419; F:nebulin binding; IPI:BHF-UCL.::GO:0017124; F:SH3 domain binding; IPI:BHF-UCL.
GO:0045214; P:sarcomere organization; IMP:BHF-UCL.
250Q99NB8    596   UBQL4_MOUSE Ubiquilin-4 OS=Mus musculus (Mous...694.1     28.9     32     49GO:0005829; C:cytosol; IDA:MGI.::GO:0005789; C:endoplasmic reticulum membrane; IDA:MGI.::GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.
GO:0031593; F:polyubiquitin binding; ISS:UniProtKB.
GO:0032434; P:regulation of proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
251Q5DTJ9    1315   MYPN_MOUSE Myopalladin OS=Mus musculus (Mouse...344.2     28.9     38     59GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
252Q6FIX7    73   HUB1_CANGA Ubiquitin-like modifier HUB1 OS=NR...634.5     27.7     30     51
253P54726    363   RD23A_MOUSE UV excision repair protein RAD23 ...665.3     28.5     26     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
GO:0003684; F:damaged DNA binding; IEA:InterPro.
GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro.
254Q09778    899   TSC1_SCHPO Tuberous sclerosis 1 protein homol...636.2     28.5     30     54GO:0033596; C:TSC1-TSC2 complex; IPI:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.
GO:0006995; P:cellular response to nitrogen starvation; IMP:PomBase.::GO:0000747; P:conjugation with cellular fusion; IMP:PomBase.::GO:0043091; P:L-arginine import; IGI:PomBase.::GO:0043547; P:positive regulation of GTPase activity; TAS:GOC.::GO:0033157; P:regulation of intracellular protein transport; IMP:PomBase.::GO:0031929; P:TOR signaling cascade; TAS:PomBase.
255Q7TMI3    803   UHRF2_MOUSE E3 ubiquitin-protein ligase UHRF2...606.5     28.1     23     53GO:0005720; C:nuclear heterochromatin; IDA:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0042393; F:histone binding; IDA:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:HGNC.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0030154; P:cell differentiation; ISS:HGNC.::GO:0008283; P:cell proliferation; ISS:HGNC.::GO:0071158; P:positive regulation of cell cycle arrest; ISS:UniProtKB.::GO:0051865; P:protein autoubiquitination; ISS:HGNC.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:HGNC.
256Q7RY84    1211   TIF31_NEUCR Protein TIF31 homolog OS=1257 / F...456.6     28.1     40     58
GO:0005488; F:binding; IEA:InterPro.
257Q92353    468   UBP6_SCHPO Ubiquitin carboxyl-terminal hydrol...458.1     28.1     27     58GO:0005654; C:nucleoplasm; IDA:PomBase.::GO:0000502; C:proteasome complex; IDA:PomBase.
GO:0004221; F:ubiquitin thiolesterase activity; IEA:InterPro.::GO:0004843; F:ubiquitin-specific protease activity; IDA:PomBase.
GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IC:PomBase.::GO:0071947; P:protein deubiquitination involved in ubiquitin-dependent protein catabolic process; IC:PomBase.
258P0C895    374   Y2010_ARATH LRR repeats and ubiquitin-like do...638.7     27.7     27     51
259Q9MZD5    101   SUMO1_CERNI Small ubiquitin-related modifier ...448.9     27.3     30     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0031625; F:ubiquitin protein ligase binding; ISS:UniProtKB.
GO:0060021; P:palate development; ISS:UniProtKB.
260Q9NRR5    601   UBQL4_HUMAN Ubiquilin-4 OS=Homo sapiens (Huma...699.2     27.7     30     48GO:0005829; C:cytosol; ISS:UniProtKB.::GO:0005789; C:endoplasmic reticulum membrane; ISS:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.
GO:0031593; F:polyubiquitin binding; IDA:UniProtKB.
GO:0032434; P:regulation of proteasomal ubiquitin-dependent protein catabolic process; IMP:UniProtKB.
261Q6DEP7    102   SUMO1_XENTR Small ubiquitin-related modifier ...449.8     27.3     30     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
262Q5EAX4    102   SMO1B_XENLA Small ubiquitin-related modifier ...449.8     27.3     30     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
records
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