Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR139C
Length:
77
Number of sequences:
5887
Description:
YDR139C RUB1 SGDID:S000002546, Chr IV from 733702-733618,733924-733776, Genome Release 64-1-1, reverse complement, Verified ORF, "Ubiquitin-like protein with similarity to mammalian NEDD8; conjugation (neddylation) substrates include the cullins Cdc53p, Rtt101p, and Cul3p; activated by Ula1p and Uba3p (E1 enzyme pair); conjugation mediated by Ubc12p (E2 enzyme)"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q03919    77   RUB1_YEAST NEDD8-like protein RUB1 OS=Sacchar...779e-48     152     100     100GO:0005737; C:cytoplasm; IDA:SGD.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0031386; F:protein tag; IDA:SGD.
GO:0045116; P:protein neddylation; IDA:SGD.
2Q4PLJ0    81   NEDD8_RABIT NEDD8 OS=Oryctolagus cuniculus (R...772e-24     92.8     58     77GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
3Q15843    81   NEDD8_HUMAN NEDD8 OS=Homo sapiens (Human). GN...772e-24     92.8     58     77GO:0005634; C:nucleus; TAS:ProtInc.
GO:0031625; F:ubiquitin protein ligase binding; IPI:UniProtKB.
GO:0009653; P:anatomical structure morphogenesis; TAS:ProtInc.::GO:0045116; P:protein neddylation; IDA:MGI.::GO:0006511; P:ubiquitin-dependent protein catabolic process; TAS:ProtInc.
4P61282    81   NEDD8_BOVIN NEDD8 OS=Bos taurus (Bovine). GN=...772e-24     92.8     58     77GO:0005634; C:nucleus; ISS:AgBase.
GO:0008104; P:protein localization; ISS:AgBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:AgBase.
5Q9VJ33    84   NEDD8_DROME NEDD8 OS=Drosophila melanogaster ...772e-24     92.8     60     75GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0031386; F:protein tag; NAS:UniProtKB.
GO:0008283; P:cell proliferation; IMP:UniProtKB.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0045116; P:protein neddylation; IMP:FlyBase.::GO:0031647; P:regulation of protein stability; IMP:UniProtKB.::GO:0030162; P:regulation of proteolysis; IMP:UniProtKB.::GO:0008589; P:regulation of smoothened signaling pathway; IMP:UniProtKB.::GO:0051438; P:regulation of ubiquitin-protein ligase activity; IMP:UniProtKB.::GO:0030431; P:sleep; IMP:FlyBase.
6Q93725    77   NEDD8_CAEEL NEDD8 OS=Caenorhabditis elegans. ...762e-24     92.4     61     76GO:0005737; C:cytoplasm; IDA:WormBase.::GO:0005634; C:nucleus; IDA:WormBase.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0040015; P:negative regulation of multicellular organism growth; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0040025; P:vulval development; IMP:WormBase.
7O14399    78   UBL1_SCHPO Ubiquitin-like protein 1 OS=Schizo...771e-23     90.9     60     73GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0019005; C:SCF ubiquitin ligase complex; IDA:PomBase.
GO:0031386; F:protein tag; IDA:PomBase.
GO:0051443; P:positive regulation of ubiquitin-protein ligase activity; NAS:PomBase.::GO:0045116; P:protein neddylation; IGI:PomBase.::GO:0007346; P:regulation of mitotic cell cycle; IMP:PomBase.
8Q54XV3    77   NEDD8_DICDI NEDD8 OS=Dictyostelium discoideum...761e-22     88.2     58     74GO:0005829; C:cytosol; ISS:dictyBase.::GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0019005; C:SCF ubiquitin ligase complex; ISS:dictyBase.
GO:0008283; P:cell proliferation; ISS:UniProtKB.::GO:0045116; P:protein neddylation; ISS:dictyBase.::GO:0031647; P:regulation of protein stability; ISS:UniProtKB.::GO:0030162; P:regulation of proteolysis; ISS:UniProtKB.::GO:0051438; P:regulation of ubiquitin-protein ligase activity; ISS:UniProtKB.
9P0C031    153   RUB2_ORYSJ Ubiquitin-NEDD8-like protein RUB2 ...772e-19     81.6     52     74GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
10P0C030    153   RUB1_ORYSJ Ubiquitin-NEDD8-like protein RUB1 ...772e-19     81.6     52     74GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
11P0C032    154   RUB3_ORYSJ Ubiquitin-like protein-NEDD8-like ...762e-19     81.6     53     75GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
12Q9SHE7    156   RUB1_ARATH Ubiquitin-NEDD8-like protein RUB1 ...772e-19     81.6     52     74GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IDA:TAIR.
GO:0009790; P:embryo development; IGI:TAIR.::GO:0009693; P:ethylene biosynthetic process; IMP:TAIR.::GO:0045116; P:protein neddylation; TAS:TAIR.::GO:0009733; P:response to auxin stimulus; TAS:TAIR.
13P0C073    153   RUB1_DESAN Ubiquitin-NEDD8-like protein RUB1 ...772e-19     81.6     52     74GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
14Q8RUC6    154   RUB2_ARATH Ubiquitin-NEDD8-like protein RUB2 ...772e-19     81.3     52     74GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
15P0C224    128   RL40_NEUCR Ubiquitin-60S ribosomal protein L4...761e-20     84     53     78GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
16P19848    76   UBIQ_COPCO Ubiquitin OS=Coprinus congregatus ...762e-20     82.4     53     76GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
17P0CH09    128   RL402_YEAST Ubiquitin-60S ribosomal protein L...762e-20     83.6     53     76GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006412; P:translation; IEA:InterPro.
18P0CH08    128   RL401_YEAST Ubiquitin-60S ribosomal protein L...762e-20     83.6     53     76GO:0022625; C:cytosolic large ribosomal subunit; TAS:SGD.::GO:0005739; C:mitochondrion; IDA:SGD.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003735; F:structural constituent of ribosome; TAS:SGD.
GO:0002181; P:cytoplasmic translation; TAS:SGD.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0016567; P:protein ubiquitination; IMP:SGD.::GO:0042254; P:ribosome biogenesis; IDA:SGD.
19P40909    129   RL40_CRYNJ Ubiquitin-60S ribosomal protein L4...762e-20     83.6     53     76GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006412; P:translation; IEA:InterPro.
20P0CH07    128   RL402_SCHPO Ubiquitin-60S ribosomal protein L...762e-20     83.6     53     76GO:0022625; C:cytosolic large ribosomal subunit; ISS:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase.
GO:0003735; F:structural constituent of ribosome; ISS:PomBase.
GO:0002181; P:cytoplasmic translation; NAS:PomBase.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0042254; P:ribosome biogenesis; ISS:PomBase.
21P0CH06    128   RL401_SCHPO Ubiquitin-60S ribosomal protein L...762e-20     83.6     53     76GO:0022625; C:cytosolic large ribosomal subunit; ISS:PomBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003735; F:structural constituent of ribosome; ISS:PomBase.
GO:0002181; P:cytoplasmic translation; NAS:PomBase.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0042254; P:ribosome biogenesis; ISS:PomBase.
22P14795    128   RL40_TRYCR Ubiquitin-60S ribosomal protein L4...762e-20     83.6     53     75GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
23P62975    76   UBIQ_RABIT Ubiquitin OS=Oryctolagus cuniculus...763e-20     82     53     76GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
24P68197    76   UBIQ_CERCA Ubiquitin OS=Ceratitis capitata (M...763e-20     82     53     76GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
25Q865C5    76   UBIQ_CAMDR Ubiquitin OS=Camelus dromedarius (...763e-20     82     53     76GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
26P49633    128   RL40_ACACA Ubiquitin-60S ribosomal protein L4...763e-20     83.2     53     76GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
27P69317    77   UBIQ_LUPPO Ubiquitin OS=Lupinus polyphyllus (...763e-20     82     53     75GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
28P69313    77   UBIQ_HELAN Ubiquitin OS=Helianthus annuus (Co...763e-20     82     53     75GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
29P69310    76   UBIQ_AVESA Ubiquitin OS=Avena sativa (Oat). G...763e-20     82     53     75GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
30P69326    77   UBIQ_WHEAT Ubiquitin OS=Triticum aestivum (Wh...763e-20     82     53     75GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
31P49632    128   RL40_CAEEL Ubiquitin-60S ribosomal protein L4...763e-20     83.2     53     76GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.::GO:0006412; P:translation; IEA:InterPro.
records
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