Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR110W
Length:
566
Number of sequences:
5887
Description:
YDR110W FOB1 SGDID:S000002517, Chr IV from 676102-677802, Genome Release 64-1-1, Verified ORF, "Nucleolar protein that binds the rDNA replication fork barrier (RFB) site; required for replication fork blocking, recombinational hotspot activity, condensin recruitment to RFB and rDNA repeat segregation; related to retroviral integrases"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1O13329    566   FOB1_YEAST DNA replication fork-blocking prot...5660     1181     100     100GO:0005730; C:nucleolus; IDA:SGD.::GO:0033553; C:rDNA heterochromatin; IDA:SGD.
GO:0043110; F:rDNA spacer replication fork barrier binding; IDA:SGD.
GO:0000183; P:chromatin silencing at rDNA; IDA:SGD.::GO:0006310; P:DNA recombination; IMP:SGD.::GO:0007580; P:extrachromosomal circular DNA accumulation involved in cell aging; IMP:SGD.::GO:0008156; P:negative regulation of DNA replication; IDA:SGD.::GO:0034503; P:protein localization to nucleolar rDNA repeats; IMP:SGD.::GO:0070550; P:rDNA condensation; IMP:SGD.::GO:0001302; P:replicative cell aging; IMP:SGD.
2Q6ZNG9    492   KRBA2_HUMAN KRAB-A domain-containing protein ...2530.003     43.9     19     43GO:0005622; C:intracellular; IEA:InterPro.
GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
3B2TIQ9    419   LEUC_CLOBB 3-isopropylmalate dehydratase larg...950.38     37     31     49
GO:0003861; F:3-isopropylmalate dehydratase activity; IEA:EC.::GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0009098; P:leucine biosynthetic process; IEA:UniProtKB-KW.
4B2UYH6    419   LEUC_CLOBA 3-isopropylmalate dehydratase larg...891.5     35.4     29     47
GO:0003861; F:3-isopropylmalate dehydratase activity; IEA:EC.::GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0009098; P:leucine biosynthetic process; IEA:UniProtKB-KW.
5Q805A1    1065   SMC5_XENLA Structural maintenance of chromoso...1012     35     30     44GO:0000781; C:chromosome, telomeric region; ISS:UniProtKB.::GO:0009295; C:nucleoid; IEA:InterPro.::GO:0016605; C:PML body; ISS:UniProtKB.::GO:0030915; C:Smc5-Smc6 complex; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0090398; P:cellular senescence; ISS:UniProtKB.::GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0007059; P:chromosome segregation; IEA:InterPro.::GO:0000724; P:double-strand break repair via homologous recombination; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0034184; P:positive regulation of maintenance of mitotic sister chromatid cohesion; ISS:UniProtKB.::GO:0045842; P:positive regulation of mitotic metaphase/anaphase transition; ISS:UniProtKB.::GO:0000722; P:telomere maintenance via recombination; ISS:UniProtKB.
6Q95T64    368   PGPLA_DROME Peptidoglycan-recognition protein...653.9     33.9     32     48GO:0005887; C:integral to plasma membrane; NAS:UniProtKB.
GO:0008745; F:N-acetylmuramoyl-L-alanine amidase activity; IEA:InterPro.::GO:0042834; F:peptidoglycan binding; NAS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0045087; P:innate immune response; NAS:UniProtKB.::GO:0009253; P:peptidoglycan catabolic process; NAS:UniProtKB.
7P33666    2003   YDBA_ECOLI Putative uncharacterized protein Y...858.6     33.1     26     44
8B2RWS6    2415   EP300_MOUSE Histone acetyltransferase p300 OS...829.7     33.1     26     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000123; C:histone acetyltransferase complex; IEA:InterPro.::GO:0005667; C:transcription factor complex; IDA:UniProtKB.
GO:0003677; F:DNA binding; ISS:UniProtKB.::GO:0004402; F:histone acetyltransferase activity; ISS:UniProtKB.::GO:0003713; F:transcription coactivator activity; IMP:UniProtKB.::GO:0008134; F:transcription factor binding; IPI:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; ISS:UniProtKB.::GO:0051216; P:cartilage development; NAS:UniProtKB.::GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0043967; P:histone H4 acetylation; ISS:UniProtKB.::GO:0018076; P:N-terminal peptidyl-lysine acetylation; ISS:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0051091; P:positive regulation of sequence-specific DNA binding transcription factor activity; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0043627; P:response to estrogen stimulus; ISS:UniProtKB.::GO:0001666; P:response to hypoxia; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
records
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