Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR092W
Length:
153
Number of sequences:
5887
Description:
YDR092W UBC13 SGDID:S000002499, Chr IV from 629876-629905,630174-630605, Genome Release 64-1-1, Verified ORF, "Ubiquitin-conjugating enzyme involved in the error-free DNA postreplication repair pathway; interacts with Mms2p to assemble ubiquitin chains at the Ub Lys-63 residue; DNA damage triggers redistribution from the cytoplasm to the nucleus"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P52490    153   UBC13_YEAST Ubiquitin-conjugating enzyme E2 1...1538e-109     313     100     100GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.::GO:0031371; C:ubiquitin conjugating enzyme complex; IPI:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:EC.
GO:0010994; P:free ubiquitin chain polymerization; IDA:SGD.::GO:0006301; P:postreplication repair; IMP:SGD.::GO:0006513; P:protein monoubiquitination; TAS:SGD.::GO:0000209; P:protein polyubiquitination; IDA:SGD.
2Q86K32    154   UBE2N_DICDI Probable ubiquitin-conjugating en...1498e-79     237     73     87
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:EC.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
3Q9EQX9    152   UBE2N_RAT Ubiquitin-conjugating enzyme E2 N O...1482e-75     228     70     84GO:0035370; C:UBC13-UEV1A complex; ISS:UniProtKB.::GO:0000151; C:ubiquitin ligase complex; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0070534; P:protein K63-linked ubiquitination; ISS:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; TAS:RGD.
4Q5R7J6    152   UBE2N_PONAB Ubiquitin-conjugating enzyme E2 N...1483e-75     228     70     84GO:0035370; C:UBC13-UEV1A complex; ISS:UniProtKB.::GO:0000151; C:ubiquitin ligase complex; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.
GO:0070534; P:protein K63-linked ubiquitination; ISS:UniProtKB.
5P61089    152   UBE2N_MOUSE Ubiquitin-conjugating enzyme E2 N...1483e-75     228     70     84GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0031372; C:UBC13-MMS2 complex; ISS:HGNC.::GO:0035370; C:UBC13-UEV1A complex; ISS:UniProtKB.::GO:0000151; C:ubiquitin ligase complex; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0043130; F:ubiquitin binding; ISS:HGNC.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.
GO:0000729; P:DNA double-strand break processing; ISS:HGNC.::GO:0000724; P:double-strand break repair via homologous recombination; ISS:HGNC.::GO:0016574; P:histone ubiquitination; ISS:HGNC.::GO:0045739; P:positive regulation of DNA repair; ISS:HGNC.::GO:0031058; P:positive regulation of histone modification; ISS:HGNC.::GO:0043123; P:positive regulation of I-kappaB kinase/NF-kappaB cascade; ISS:HGNC.::GO:0051092; P:positive regulation of NF-kappaB transcription factor activity; ISS:HGNC.::GO:0051443; P:positive regulation of ubiquitin-protein ligase activity; ISS:HGNC.::GO:0006301; P:postreplication repair; ISS:HGNC.::GO:0070534; P:protein K63-linked ubiquitination; ISS:UniProtKB.::GO:0033182; P:regulation of histone ubiquitination; ISS:HGNC.::GO:0050852; P:T cell receptor signaling pathway; ISS:HGNC.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IDA:MGI.
6P61088    152   UBE2N_HUMAN Ubiquitin-conjugating enzyme E2 N...1483e-75     228     70     84GO:0005829; C:cytosol; TAS:Reactome.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0031372; C:UBC13-MMS2 complex; IDA:HGNC.::GO:0035370; C:UBC13-UEV1A complex; IDA:UniProtKB.::GO:0000151; C:ubiquitin ligase complex; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0043130; F:ubiquitin binding; IDA:HGNC.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.
GO:0019221; P:cytokine-mediated signaling pathway; TAS:Reactome.::GO:0000729; P:DNA double-strand break processing; IMP:HGNC.::GO:0000724; P:double-strand break repair via homologous recombination; IMP:HGNC.::GO:0016574; P:histone ubiquitination; IMP:HGNC.::GO:0045087; P:innate immune response; TAS:Reactome.::GO:0002755; P:MyD88-dependent toll-like receptor signaling pathway; TAS:Reactome.::GO:0070423; P:nucleotide-binding oligomerization domain containing signaling pathway; TAS:Reactome.::GO:0045739; P:positive regulation of DNA repair; IMP:HGNC.::GO:0031058; P:positive regulation of histone modification; IMP:HGNC.::GO:0043123; P:positive regulation of I-kappaB kinase/NF-kappaB cascade; IMP:HGNC.::GO:0051092; P:positive regulation of NF-kappaB transcription factor activity; IMP:UniProtKB.::GO:0051443; P:positive regulation of ubiquitin-protein ligase activity; IMP:HGNC.::GO:0006301; P:postreplication repair; IMP:HGNC.::GO:0070534; P:protein K63-linked ubiquitination; IDA:UniProtKB.::GO:0033182; P:regulation of histone ubiquitination; IMP:HGNC.::GO:0050852; P:T cell receptor signaling pathway; IMP:UniProtKB.::GO:0008063; P:Toll signaling pathway; TAS:Reactome.::GO:0034130; P:toll-like receptor 1 signaling pathway; TAS:Reactome.::GO:0034134; P:toll-like receptor 2 signaling pathway; TAS:Reactome.::GO:0034142; P:toll-like receptor 4 signaling pathway; TAS:Reactome.
7Q0P5K3    152   UBE2N_BOVIN Ubiquitin-conjugating enzyme E2 N...1483e-75     228     70     84GO:0035370; C:UBC13-UEV1A complex; ISS:UniProtKB.::GO:0000151; C:ubiquitin ligase complex; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.
GO:0070534; P:protein K63-linked ubiquitination; ISS:UniProtKB.
8Q4R4I1    152   UBE2N_MACFA Ubiquitin-conjugating enzyme E2 N...1482e-74     225     70     84GO:0035370; C:UBC13-UEV1A complex; ISS:UniProtKB.::GO:0000151; C:ubiquitin ligase complex; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0070534; P:protein K63-linked ubiquitination; ISS:UniProtKB.
9P35128    151   UBE2N_DROME Ubiquitin-conjugating enzyme E2 N...1482e-74     225     71     84
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:EC.
GO:0007412; P:axon target recognition; IMP:FlyBase.::GO:0007629; P:flight behavior; IMP:FlyBase.::GO:0007625; P:grooming behavior; IMP:FlyBase.::GO:0007630; P:jump response; IMP:FlyBase.::GO:0008594; P:photoreceptor cell morphogenesis; IMP:FlyBase.::GO:0072347; P:response to anesthetic; IMP:FlyBase.
10Q94A97    153   UBC35_ARATH Ubiquitin-conjugating enzyme E2 3...1477e-74     224     69     86GO:0031372; C:UBC13-MMS2 complex; IPI:TAIR.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:TAIR.
GO:0006301; P:postreplication repair; IGI:TAIR.::GO:0046686; P:response to cadmium ion; IEP:TAIR.::GO:0010039; P:response to iron ion; IMP:TAIR.::GO:0010053; P:root epidermal cell differentiation; IGI:TAIR.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IDA:TAIR.
11Q9FZ48    153   UBC36_ARATH Ubiquitin-conjugating enzyme E2 3...1471e-73     224     68     86GO:0005829; C:cytosol; IDA:TAIR.::GO:0005886; C:plasma membrane; IDA:TAIR.::GO:0031372; C:UBC13-MMS2 complex; IPI:TAIR.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:TAIR.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:TAIR.
GO:0010039; P:response to iron ion; IMP:TAIR.::GO:0010053; P:root epidermal cell differentiation; IGI:TAIR.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IDA:TAIR.
12O13685    148   UBC13_SCHPO Ubiquitin-conjugating enzyme E2 1...1469e-71     216     71     82GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0042803; F:protein homodimerization activity; IDA:PomBase.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:EC.
GO:0071479; P:cellular response to ionizing radiation; IDA:PomBase.::GO:0006301; P:postreplication repair; IMP:PomBase.::GO:0070534; P:protein K63-linked ubiquitination; IDA:PomBase.
13Q5JXB2    153   UE2NL_HUMAN Putative ubiquitin-conjugating en...1492e-65     203     66     78
GO:0016881; F:acid-amino acid ligase activity; IEA:InterPro.
14P15732    148   UBC5_YEAST Ubiquitin-conjugating enzyme E2-16...1461e-43     147     49     64GO:0000502; C:proteasome complex; IPI:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:SGD.
GO:0000209; P:protein polyubiquitination; IDA:SGD.::GO:0006950; P:response to stress; IDA:SGD.
15Q9Y2X8    147   UB2D4_HUMAN Ubiquitin-conjugating enzyme E2 D...1432e-43     146     50     65
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.
GO:0070979; P:protein K11-linked ubiquitination; IDA:UniProtKB.::GO:0044314; P:protein K27-linked ubiquitination; IDA:UniProtKB.::GO:0035519; P:protein K29-linked ubiquitination; IDA:UniProtKB.::GO:0070936; P:protein K48-linked ubiquitination; IDA:UniProtKB.::GO:0085020; P:protein K6-linked ubiquitination; IDA:UniProtKB.::GO:0070534; P:protein K63-linked ubiquitination; IDA:UniProtKB.
16P35129    147   UBC2_CAEEL Ubiquitin-conjugating enzyme E2 2 ...1432e-43     146     50     66
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0031625; F:ubiquitin protein ligase binding; IPI:WormBase.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:WormBase.
GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0016477; P:cell migration; IMP:WormBase.::GO:0008340; P:determination of adult lifespan; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0007281; P:germ cell development; IMP:WormBase.::GO:0008406; P:gonad development; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0007126; P:meiosis; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IDA:WormBase.
17D3ZDK2    147   UB2D1_RAT Ubiquitin-conjugating enzyme E2 D1 ...1433e-43     145     49     66GO:0005737; C:cytoplasm; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.
GO:0070936; P:protein K48-linked ubiquitination; ISS:UniProtKB.
18P61080    147   UB2D1_MOUSE Ubiquitin-conjugating enzyme E2 D...1433e-43     145     49     66GO:0005737; C:cytoplasm; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:MGI.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.
GO:0031398; P:positive regulation of protein ubiquitination; ISS:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
19P51668    147   UB2D1_HUMAN Ubiquitin-conjugating enzyme E2 D...1433e-43     145     49     66GO:0005829; C:cytosol; TAS:Reactome.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.
GO:0031145; P:anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process; TAS:Reactome.::GO:0030509; P:BMP signaling pathway; TAS:Reactome.::GO:0007094; P:mitotic cell cycle spindle assembly checkpoint; TAS:Reactome.::GO:0051436; P:negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.::GO:0051437; P:positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.::GO:0070936; P:protein K48-linked ubiquitination; IDA:UniProtKB.::GO:0007179; P:transforming growth factor beta receptor signaling pathway; TAS:Reactome.
20Q2TA10    147   UB2D1_BOVIN Ubiquitin-conjugating enzyme E2 D...1433e-43     145     49     66GO:0005737; C:cytoplasm; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.
GO:0070936; P:protein K48-linked ubiquitination; ISS:UniProtKB.
21P25867    147   UBCD1_DROME Ubiquitin-conjugating enzyme E2-1...1434e-43     145     50     66GO:0005875; C:microtubule associated complex; IDA:FlyBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IGI:FlyBase.
GO:0051276; P:chromosome organization; IMP:FlyBase.::GO:0001751; P:compound eye photoreceptor cell differentiation; IMP:FlyBase.::GO:0008054; P:cyclin catabolic process; IMP:FlyBase.::GO:0048132; P:female germ-line stem cell division; IMP:FlyBase.::GO:0030718; P:germ-line stem cell maintenance; IMP:FlyBase.::GO:0007140; P:male meiosis; IMP:FlyBase.::GO:0007067; P:mitosis; IMP:FlyBase.::GO:0016322; P:neuron remodeling; IDA:FlyBase.::GO:0031647; P:regulation of protein stability; IMP:FlyBase.::GO:0045676; P:regulation of R7 cell differentiation; IGI:FlyBase.::GO:0007286; P:spermatid development; IMP:FlyBase.
22P62840    147   UB2D2_XENLA Ubiquitin-conjugating enzyme E2 D...1435e-43     145     49     65
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:EC.
23P62839    147   UB2D2_RAT Ubiquitin-conjugating enzyme E2 D2 ...1435e-43     145     49     65
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.
GO:0070936; P:protein K48-linked ubiquitination; ISS:UniProtKB.
24P62838    147   UB2D2_MOUSE Ubiquitin-conjugating enzyme E2 D...1435e-43     145     49     65
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.
25P62837    147   UB2D2_HUMAN Ubiquitin-conjugating enzyme E2 D...1435e-43     145     49     65
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.
GO:0070936; P:protein K48-linked ubiquitination; IDA:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; TAS:ProtInc.
26Q1RMX2    147   UB2D2_BOVIN Ubiquitin-conjugating enzyme E2 D...1435e-43     145     49     65
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.
GO:0070936; P:protein K48-linked ubiquitination; ISS:UniProtKB.
27P15731    148   UBC4_YEAST Ubiquitin-conjugating enzyme E2 4 ...1461e-42     144     49     63GO:0000502; C:proteasome complex; IPI:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0043130; F:ubiquitin binding; IDA:SGD.::GO:0004842; F:ubiquitin-protein ligase activity; IMP:UniProtKB.
GO:0006513; P:protein monoubiquitination; IDA:SGD.::GO:0000209; P:protein polyubiquitination; IMP:UniProtKB.::GO:0006950; P:response to stress; IDA:SGD.::GO:0043162; P:ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway; IMP:SGD.
28P46595    147   UBC4_SCHPO Ubiquitin-conjugating enzyme E2 4 ...1431e-42     144     49     64GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.
GO:0008054; P:cyclin catabolic process; IGI:PomBase.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0000209; P:protein polyubiquitination; ISS:UniProtKB.
29Q06AA9    147   UB2D2_PIG Ubiquitin-conjugating enzyme E2 D2 ...1432e-42     144     48     64
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.
GO:0070936; P:protein K48-linked ubiquitination; ISS:UniProtKB.
30P35134    148   UBC11_ARATH Ubiquitin-conjugating enzyme E2 1...1482e-42     144     48     66
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:TAIR.
GO:0006511; P:ubiquitin-dependent protein catabolic process; IDA:TAIR.
31P61078    147   UB2D3_RAT Ubiquitin-conjugating enzyme E2 D3 ...1432e-42     144     48     64GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.::GO:0070979; P:protein K11-linked ubiquitination; ISS:UniProtKB.::GO:0070936; P:protein K48-linked ubiquitination; ISS:UniProtKB.
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