Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR088C
Length:
382
Number of sequences:
5887
Description:
YDR088C SLU7 SGDID:S000002495, Chr IV from 619645-618497, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA splicing factor, required for ATP-independent portion of 2nd catalytic step of spliceosomal RNA splicing; interacts with Prp18p; contains zinc knuckle domain"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q02775    382   SLU7_YEAST Pre-mRNA-splicing factor SLU7 OS=S...3820     786     100     100GO:0005681; C:spliceosomal complex; IDA:SGD.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0000350; P:generation of catalytic spliceosome for second transesterification step; IDA:SGD.
2Q6FRY5    318   SLU7_CANGA Pre-mRNA-splicing factor SLU7 OS=N...3713e-81     258     43     57GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
3Q6CK06    341   SLU7_KLULA Pre-mRNA-splicing factor SLU7 OS=1...3305e-36     139     34     49GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
4Q6C9T0    416   SLU7_YARLI Pre-mRNA-splicing factor SLU7 OS=l...3207e-25     107     31     45GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
5Q51LA6    474   SLU7_MAGO7 Pre-mRNA-splicing factor SLU7 OS=b...3346e-17     85.9     27     43GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
6Q9Y7Y2    379   SLU7_SCHPO Pre-mRNA-splicing factor slu7 OS=S...3523e-16     82.8     27     41GO:0005681; C:spliceosomal complex; ISS:PomBase.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0000350; P:generation of catalytic spliceosome for second transesterification step; ISS:PomBase.
7Q6BMK7    370   SLU7_DEBHA Pre-mRNA-splicing factor SLU7 OS=0...2983e-16     82.8     29     46GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
8Q9VAQ7    574   SLU7_DROME Pre-mRNA-splicing factor Slu7 OS=D...3224e-16     83.2     27     42GO:0016607; C:nuclear speck; ISS:UniProtKB.::GO:0005681; C:spliceosomal complex; ISS:FlyBase.
GO:0030628; F:pre-mRNA 3'-splice site binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007052; P:mitotic spindle organization; IMP:FlyBase.::GO:0000389; P:nuclear mRNA 3'-splice site recognition; ISS:UniProtKB.
9Q4WWR2    476   SLU7_ASPFU Pre-mRNA-splicing factor slu7 OS=A...3340.00000000000008     76.3     28     46GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
10Q7SDY6    416   SLU7_NEUCR Pre-mRNA-splicing factor slu-7 OS=...3290.0000000000001     75.1     26     42GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
11Q5B3U2    466   SLU7_EMENI Pre-mRNA-splicing factor slu7 OS=1...3290.0000000000008     73.2     27     44GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
12P0CR52    574   SLU7_CRYNJ Pre-mRNA-splicing factor SLU7 OS=A...3520.000000000002     72     23     39GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
13P0CR53    574   SLU7_CRYNB Pre-mRNA-splicing factor SLU7 OS=(...3520.000000000002     72     23     39GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
14Q74ZN9    266   SLU7_ASHGO Pre-mRNA-splicing factor SLU7 OS=Y...1540.000000000008     68.6     31     47GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
15Q21278    647   SLU7_CAEEL Pre-mRNA-splicing factor SLU7 OS=C...2460.00000000003     68.6     27     46GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0008340; P:determination of adult lifespan; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0007281; P:germ cell development; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0018996; P:molting cycle, collagen and cuticulin-based cuticle; IMP:WormBase.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0042127; P:regulation of cell proliferation; IMP:WormBase.::GO:0040020; P:regulation of meiosis; IMP:WormBase.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
16Q9SHY8    535   SLU7A_ARATH Pre-mRNA-splicing factor SLU7-A O...3060.00000000005     67.4     23     41GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003727; F:single-stranded RNA binding; TAS:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008284; P:positive regulation of cell proliferation; IMP:TAIR.::GO:0008380; P:RNA splicing; TAS:TAIR.
17Q5ZIG2    564   SLU7_CHICK Pre-mRNA-splicing factor SLU7 OS=G...3340.00000000009     67     24     41GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
18Q6ZK48    536   SLU7_ORYSJ Pre-mRNA-splicing factor SLU7 OS=O...3090.0000000004     65.1     23     39GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
19A2YQU8    536   SLU7_ORYSI Pre-mRNA-splicing factor SLU7 OS=O...3090.0000000004     65.1     23     39GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
20Q3KQD1    580   SLU7_XENLA Pre-mRNA-splicing factor SLU7 OS=X...3810.0000000008     63.9     24     39GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
21Q54TA0    558   SLU7_DICDI Pre-mRNA-splicing factor slu7 OS=D...2770.000000002     63.2     27     46GO:0005681; C:spliceosomal complex; ISS:dictyBase.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; ISS:dictyBase.::GO:0000375; P:RNA splicing, via transesterification reactions; ISS:dictyBase.
22Q5U3F2    571   SLU7_DANRE Pre-mRNA-splicing factor SLU7 OS=D...2740.000000004     61.6     25     41GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
23Q8BHJ9    585   SLU7_MOUSE Pre-mRNA-splicing factor SLU7 OS=M...3520.000000009     60.8     24     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; ISS:HGNC.::GO:0030532; C:small nuclear ribonucleoprotein complex; ISS:HGNC.
GO:0030628; F:pre-mRNA 3'-splice site binding; ISS:HGNC.::GO:0000386; F:second spliceosomal transesterification activity; ISS:HGNC.::GO:0008270; F:zinc ion binding; ISS:HGNC.
GO:0000380; P:alternative nuclear mRNA splicing, via spliceosome; ISS:HGNC.::GO:0000389; P:nuclear mRNA 3'-splice site recognition; ISS:HGNC.
24O23174    536   SLU7B_ARATH Pre-mRNA-splicing factor SLU7-B O...3090.00000001     60.5     21     39GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003727; F:single-stranded RNA binding; TAS:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008284; P:positive regulation of cell proliferation; IGI:TAIR.::GO:0008380; P:RNA splicing; TAS:TAIR.
25Q80ZG5    586   SLU7_RAT Pre-mRNA-splicing factor SLU7 OS=Rat...3520.00000001     60.5     24     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; ISS:HGNC.::GO:0030532; C:small nuclear ribonucleoprotein complex; ISS:HGNC.
GO:0030628; F:pre-mRNA 3'-splice site binding; ISS:HGNC.::GO:0000386; F:second spliceosomal transesterification activity; ISS:HGNC.::GO:0008270; F:zinc ion binding; ISS:HGNC.
GO:0000380; P:alternative nuclear mRNA splicing, via spliceosome; ISS:HGNC.::GO:0000389; P:nuclear mRNA 3'-splice site recognition; ISS:HGNC.
26O95391    586   SLU7_HUMAN Pre-mRNA-splicing factor SLU7 OS=H...3520.00000001     60.5     24     41GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0016607; C:nuclear speck; IDA:HGNC.::GO:0030532; C:small nuclear ribonucleoprotein complex; IDA:HGNC.
GO:0030628; F:pre-mRNA 3'-splice site binding; IDA:HGNC.::GO:0000386; F:second spliceosomal transesterification activity; IDA:HGNC.::GO:0008270; F:zinc ion binding; IDA:HGNC.
GO:0000380; P:alternative nuclear mRNA splicing, via spliceosome; IDA:HGNC.::GO:0033554; P:cellular response to stress; IDA:UniProtKB.::GO:0006886; P:intracellular protein transport; IDA:UniProtKB.::GO:0000389; P:nuclear mRNA 3'-splice site recognition; IDA:HGNC.
27Q5ADL4    350   SLU7_CANAL Pre-mRNA-splicing factor SLU7 OS=C...2900.00000002     58.9     26     40GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
28Q3ZBE5    586   SLU7_BOVIN Pre-mRNA-splicing factor SLU7 OS=B...3510.00000004     58.9     24     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
29Q4R4P2    586   SLU7_MACFA Pre-mRNA-splicing factor SLU7 OS=M...3520.00000008     57.8     24     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
30Q6FSJ4    666   RPC3_CANGA DNA-directed RNA polymerase III su...1321.1     35     28     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
31O81016    1420   AB32G_ARATH ABC transporter G family member 3...591.6     34.7     31     58GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IDA:TAIR.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.
GO:0042335; P:cuticle development; IMP:TAIR.::GO:0006810; P:transport; IEA:UniProtKB-KW.
records
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