Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR088C
Length:
382
Number of sequences:
5887
Description:
YDR088C SLU7 SGDID:S000002495, Chr IV from 619645-618497, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA splicing factor, required for ATP-independent portion of 2nd catalytic step of spliceosomal RNA splicing; interacts with Prp18p; contains zinc knuckle domain"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31O81016    1420   AB32G_ARATH ABC transporter G family member 3...591.6     34.7     31     58GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IDA:TAIR.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.
GO:0042335; P:cuticle development; IMP:TAIR.::GO:0006810; P:transport; IEA:UniProtKB-KW.
32Q5UQW2    360   DIPP_MIMIV Putative mRNA-decapping protein OS...642.1     33.9     25     59
GO:0008486; F:diphosphoinositol-polyphosphate diphosphatase activity; IEA:EC.::GO:0052840; F:inositol diphosphate tetrakisphosphate diphosphatase activity; IEA:EC.::GO:0052846; F:inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 1-diphosphatase activity; IEA:EC.::GO:0052847; F:inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity; IEA:EC.::GO:0052843; F:inositol-1-diphosphate-2,3,4,5,6-pentakisphosphate diphosphatase activity; IEA:EC.::GO:0052848; F:inositol-3,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity; IEA:EC.::GO:0052844; F:inositol-3-diphosphate-1,2,4,5,6-pentakisphosphate diphosphatase activity; IEA:EC.::GO:0052845; F:inositol-5-diphosphate-1,2,3,4,6-pentakisphosphate diphosphatase activity; IEA:EC.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
33P05959    1436   POL_HV1RH Gag-Pol polyprotein OS=RF/HAT3) (HI...362.3     34.3     44     56GO:0005829; C:cytosol; TAS:Reactome.::GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.::GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-KW.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0004533; F:exoribonuclease H activity; IEA:EC.::GO:0004523; F:ribonuclease H activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030260; P:entry into host cell; TAS:Reactome.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0019047; P:provirus integration; TAS:Reactome.::GO:0006278; P:RNA-dependent DNA replication; TAS:Reactome.::GO:0019061; P:uncoating of virus; TAS:Reactome.::GO:0046797; P:viral procapsid maturation; IEA:UniProtKB-KW.
34Q66283    1372   CP_CSVMV Putative Polyprotein CP OS=Cassava v...393     33.9     44     56GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006810; P:transport; IEA:InterPro.
35A1B592    901   SECA_PARDP Protein translocase subunit SecA O...963.5     33.5     32     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0017038; P:protein import; IEA:InterPro.::GO:0006605; P:protein targeting; IEA:InterPro.
36Q9PR42    943   UVRA_UREPA UvrABC system protein A OS=Ureapla...1234     33.5     25     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0009380; C:excinuclease repair complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0009381; F:excinuclease ABC activity; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
37A8FJT7    294   LPXC_CAMJ8 UDP-3-O-[3-hydroxymyristoyl] N-ace...1194.7     32.7     28     45
GO:0008759; F:UDP-3-O-[3-hydroxymyristoyl N-acetylglucosamine deacetylase activity; IEA:InterPro.
GO:0009245; P:lipid A biosynthetic process; IEA:UniProtKB-KW.]
38P05890    501   GAG_HV1RH Gag polyprotein OS=RF/HAT3) (HIV-1)...364.7     33.1     44     56GO:0005829; C:cytosol; TAS:Reactome.::GO:0010008; C:endosome membrane; TAS:Reactome.::GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.::GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0046788; P:egress of virus within host cell; TAS:Reactome.::GO:0030260; P:entry into host cell; TAS:Reactome.::GO:0019047; P:provirus integration; TAS:Reactome.::GO:0006278; P:RNA-dependent DNA replication; TAS:Reactome.::GO:0019061; P:uncoating of virus; TAS:Reactome.
39O76743    1156   GLH4_CAEEL ATP-dependent RNA helicase glh-4 O...267.9     32.3     46     62GO:0043186; C:P granule; IDA:WormBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0008432; F:JUN kinase binding; IPI:WormBase.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007276; P:gamete generation; IMP:WormBase.::GO:0042127; P:regulation of cell proliferation; IMP:WormBase.
records
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