UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YDR080W

Length:

992

Number of sequences:

5887

Description:

YDR080W VPS41 SGDID:S000002487, Chr IV from 604008-606986, Genome Release 64-1-1, Verified ORF, "Vacuolar membrane protein that is a subunit of the homotypic vacuole fusion and vacuole protein sorting (HOPS) complex; essential for membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of protein transport"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
31	A6SJ85	434	ATG18_BOTFB Autophagy-related protein 18 OS=c...	73	3.4	35	34	53	GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.::GO:0005774; C:vacuolar membrane; IEA:UniProtKB-SubCell.
									GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
32	P34574	1681	CLH_CAEEL Probable clathrin heavy chain 1 OS=...	139	4.4	35	20	47	GO:0016324; C:apical plasma membrane; IDA:WormBase.::GO:0030132; C:clathrin coat of coated pit; IEA:InterPro.::GO:0030130; C:clathrin coat of trans-Golgi network vesicle; IEA:InterPro.::GO:0045334; C:clathrin-coated endocytic vesicle; IDA:WormBase.::GO:0009898; C:internal side of plasma membrane; IDA:WormBase.
									GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
									GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0008340; P:determination of adult lifespan; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0030163; P:protein catabolic process; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.
33	P26405	477	RFBK_SALTY Phosphomannomutase OS=Salmonella t...	76	5.3	34.3	32	47	GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
									GO:0000287; F:magnesium ion binding; IEA:InterPro.::GO:0004615; F:phosphomannomutase activity; IEA:EC.
									GO:0009103; P:lipopolysaccharide biosynthetic process; IEA:UniProtKB-KW.
34	Q8WUH2	860	TGFA1_HUMAN Transforming growth factor-beta r...	122	5.6	34.7	30	41	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IDA:UniProtKB.
									GO:0046332; F:SMAD binding; IDA:UniProtKB.::GO:0005083; F:small GTPase regulator activity; IEA:InterPro.::GO:0005160; F:transforming growth factor beta receptor binding; IDA:UniProtKB.
									GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0007179; P:transforming growth factor beta receptor signaling pathway; TAS:UniProtKB.::GO:0016192; P:vesicle-mediated transport; IEA:InterPro.
35	P32479	840	HIR1_YEAST Protein HIR1 OS=Saccharomyces cere...	43	5.6	34.7	37	65	GO:0000775; C:chromosome, centromeric region; IDA:SGD.::GO:0000417; C:HIR complex; IDA:SGD.
									GO:0003682; F:chromatin binding; IEA:InterPro.::GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0003714; F:transcription corepressor activity; IDA:SGD.
									GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006336; P:DNA replication-independent nucleosome assembly; IDA:SGD.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IDA:SGD.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IGI:SGD.
36	Q5UQ35	990	YR811_MIMIV Putative ariadne-like RING finger...	147	6.5	34.3	27	41
									GO:0008270; F:zinc ion binding; IEA:InterPro.
37	A7EW77	423	ATG18_SCLS1 Autophagy-related protein 18 OS=m...	77	7	33.9	31	52	GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.::GO:0005774; C:vacuolar membrane; IEA:UniProtKB-SubCell.
									GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
38	Q9BV38	432	WDR18_HUMAN WD repeat-containing protein 18 O...	56	7.6	33.9	32	50
									GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
39	Q4IBR4	1046	HIR1_GIBZE Protein HIR1 OS=(Wheat head blight...	69	7.6	34.3	33	49	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003682; F:chromatin binding; IEA:InterPro.
									GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
40	Q6NYH1	1187	IF122_DANRE Intraflagellar transport protein ...	72	7.7	34.3	29	50	GO:0005929; C:cilium; IEA:UniProtKB-SubCell.::GO:0005932; C:microtubule basal body; IEA:UniProtKB-SubCell.
									GO:0048593; P:camera-type eye morphogenesis; IMP:UniProtKB.::GO:0060271; P:cilium morphogenesis; IMP:UniProtKB.::GO:0010172; P:embryonic body morphogenesis; IMP:UniProtKB.::GO:0007507; P:heart development; IMP:UniProtKB.::GO:0008589; P:regulation of smoothened signaling pathway; IMP:UniProtKB.::GO:0072001; P:renal system development; IMP:UniProtKB.
41	A7KAM8	427	ATG18_PENCW Autophagy-related protein 18 OS=5...	54	8	33.9	39	57	GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.::GO:0005774; C:vacuolar membrane; IEA:UniProtKB-SubCell.
									GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
42	Q9PU36	5120	PCLO_CHICK Protein piccolo OS=Gallus gallus (...	81	8.1	34.3	28	42	GO:0030054; C:cell junction; IEA:UniProtKB-KW.::GO:0045202; C:synapse; ISS:UniProtKB.
									GO:0005509; F:calcium ion binding; ISS:UniProtKB.::GO:0005544; F:calcium-dependent phospholipid binding; ISS:UniProtKB.::GO:0005522; F:profilin binding; ISS:UniProtKB.
									GO:0007010; P:cytoskeleton organization; ISS:UniProtKB.

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