Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR066C
Length:
196
Number of sequences:
5887
Description:
YDR066C RTR2 SGDID:S000002473, Chr IV from 582498-581908, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Protein of unknown function with high similarity to Rtr1p; exhibits genetic interactions with Rtr1p; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YDR066C is not an essential gene"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q12378    196   RTR2_YEAST RNA polymerase II subunit B1 CTD p...1964e-144     406     100     100GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004721; F:phosphoprotein phosphatase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
2P40084    226   RTR1_YEAST RNA polymerase II subunit B1 CTD p...1814e-26     105     35     54GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0008420; F:CTD phosphatase activity; IDA:SGD.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0070940; P:dephosphorylation of RNA polymerase II C-terminal domain; IDA:SGD.::GO:0006366; P:transcription from RNA polymerase II promoter; IMP:SGD.
3Q5I0E6    609   RPAP2_RAT RNA polymerase II subunit B1 CTD ph...1060.00005     46.6     28     43GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; ISS:UniProtKB.
GO:0008420; F:CTD phosphatase activity; ISS:UniProtKB.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0070940; P:dephosphorylation of RNA polymerase II C-terminal domain; ISS:UniProtKB.::GO:0009301; P:snRNA transcription; ISS:UniProtKB.
4A8DYY5    143   RPAP2_DROME Putative RNA polymerase II subuni...1240.0001     43.5     30     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004721; F:phosphoprotein phosphatase activity; IEA:UniProtKB-KW.
5Q8VC34    614   RPAP2_MOUSE Putative RNA polymerase II subuni...1060.0001     45.4     26     44GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; ISS:UniProtKB.
GO:0008420; F:CTD phosphatase activity; ISS:UniProtKB.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0070940; P:dephosphorylation of RNA polymerase II C-terminal domain; ISS:UniProtKB.::GO:0009301; P:snRNA transcription; ISS:UniProtKB.
6Q8IXW5    612   RPAP2_HUMAN Putative RNA polymerase II subuni...1050.0005     43.5     27     43GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IDA:UniProtKB.
GO:0008420; F:CTD phosphatase activity; IMP:UniProtKB.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0070940; P:dephosphorylation of RNA polymerase II C-terminal domain; IMP:UniProtKB.::GO:0009301; P:snRNA transcription; IMP:UniProtKB.
7Q5RA37    612   RPAP2_PONAB Putative RNA polymerase II subuni...1050.002     42.4     26     43GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; ISS:UniProtKB.
GO:0008420; F:CTD phosphatase activity; ISS:UniProtKB.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0070940; P:dephosphorylation of RNA polymerase II C-terminal domain; ISS:UniProtKB.::GO:0009301; P:snRNA transcription; ISS:UniProtKB.
8F6RRD7    608   RPAP2_BOVIN Putative RNA polymerase II subuni...890.002     42     28     47GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; ISS:UniProtKB.
GO:0008420; F:CTD phosphatase activity; ISS:UniProtKB.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0070940; P:dephosphorylation of RNA polymerase II C-terminal domain; ISS:UniProtKB.::GO:0009301; P:snRNA transcription; ISS:UniProtKB.
9B0UYH6    601   RPAP2_DANRE Putative RNA polymerase II subuni...1180.017     38.9     27     43GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; ISS:UniProtKB.
GO:0008420; F:CTD phosphatase activity; ISS:UniProtKB.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0070940; P:dephosphorylation of RNA polymerase II C-terminal domain; ISS:UniProtKB.::GO:0009301; P:snRNA transcription; ISS:UniProtKB.
10Q64605    1907   PTPRS_RAT Receptor-type tyrosine-protein phos...713     32.3     30     46GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0004725; F:protein tyrosine phosphatase activity; IDA:RGD.::GO:0004872; F:receptor activity; IEA:UniProtKB-KW.
GO:0007155; P:cell adhesion; IEA:UniProtKB-KW.
11B0V2N1    1907   PTPRS_MOUSE Receptor-type tyrosine-protein ph...713     32.3     30     46GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0004725; F:protein tyrosine phosphatase activity; IEA:EC.::GO:0004872; F:receptor activity; IEA:UniProtKB-KW.
GO:0007155; P:cell adhesion; IEA:UniProtKB-KW.::GO:0021549; P:cerebellum development; IMP:MGI.::GO:0021987; P:cerebral cortex development; IMP:MGI.::GO:0022038; P:corpus callosum development; IMP:MGI.::GO:0021766; P:hippocampus development; IMP:MGI.::GO:0021510; P:spinal cord development; IMP:MGI.
12Q505D1    1053   ANR28_MOUSE Serine/threonine-protein phosphat...953.5     32     25     45GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
13O15084    1053   ANR28_HUMAN Serine/threonine-protein phosphat...953.6     32     25     45GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
14Q6AVZ9    726   RPAP2_ORYSJ Putative RNA polymerase II subuni...344.3     31.6     44     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004721; F:phosphoprotein phosphatase activity; IEA:UniProtKB-KW.
15A2Y040    726   RPAP2_ORYSI Putative RNA polymerase II subuni...344.3     31.6     44     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004721; F:phosphoprotein phosphatase activity; IEA:UniProtKB-KW.
16Q27549    694   ACSA_CRYPV Acetyl-coenzyme A synthetase OS=Cr...376     31.2     38     62
GO:0003987; F:acetate-CoA ligase activity; IEA:EC.::GO:0016208; F:AMP binding; IEA:InterPro.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
17Q2SS99    794   SYFB_MYCCT Phenylalanine--tRNA ligase beta su...427.3     31.2     38     64GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0000287; F:magnesium ion binding; IEA:InterPro.::GO:0004826; F:phenylalanine-tRNA ligase activity; IEA:EC.::GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
GO:0006432; P:phenylalanyl-tRNA aminoacylation; IEA:InterPro.::GO:0008033; P:tRNA processing; IEA:InterPro.
18Q7V3R5    779   PURL_PROMP Phosphoribosylformylglycinamidine ...607.4     31.2     30     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004642; F:phosphoribosylformylglycinamidine synthase activity; IEA:EC.
GO:0006189; P:'de novo' IMP biosynthetic process; IEA:InterPro.
19Q54B37    1155   GXCJ_DICDI RhoGEF domain-containing protein g...799.3     30.8     32     48GO:0005622; C:intracellular; IEA:InterPro.
GO:0005089; F:Rho guanyl-nucleotide exchange factor activity; IEA:InterPro.
GO:0035023; P:regulation of Rho protein signal transduction; IEA:InterPro.
20P05469    594   YKP3_KLULA Uncharacterized killer plasmid pGK...859.9     30.4     27     49
21Q3B1H7    1301   RPOB_PELLD DNA-directed RNA polymerase subuni...759.9     30.8     32     53
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
records
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