Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR060W
Length:
1025
Number of sequences:
5887
Description:
YDR060W MAK21 SGDID:S000002467, Chr IV from 570649-573726, Genome Release 64-1-1, Verified ORF, "Constituent of 66S pre-ribosomal particles, required for large (60S) ribosomal subunit biogenesis; involved in nuclear export of pre-ribosomes; required for maintenance of dsRNA virus; homolog of human CAATT-binding protein"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q12176    1025   MAK21_YEAST Ribosome biogenesis protein MAK21...10250     2079     100     100GO:0030690; C:Noc1p-Noc2p complex; IPI:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000027; P:ribosomal large subunit assembly; IMP:SGD.
2O36021    860   YEK9_SCHPO Uncharacterized protein C4F10.09c ...8471e-163     511     40     59GO:0030690; C:Noc1p-Noc2p complex; ISS:PomBase.
GO:0042254; P:ribosome biogenesis; ISS:PomBase.
3P53569    1052   CEBPZ_MOUSE CCAAT/enhancer-binding protein ze...10516e-104     355     30     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
4Q03701    1054   CEBPZ_HUMAN CCAAT/enhancer-binding protein ze...10778e-100     344     29     45GO:0005634; C:nucleus; TAS:ProtInc.
GO:0003677; F:DNA binding; TAS:ProtInc.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006366; P:transcription from RNA polymerase II promoter; TAS:ProtInc.
5Q19753    953   YU0O_CAEEL Uncharacterized protein F23B12.7 O...1600.00000005     60.8     28     47
GO:0005488; F:binding; IEA:InterPro.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.
6Q8WTT2    800   NOC3L_HUMAN Nucleolar complex protein 3 homol...1770.00001     52.8     28     46GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
7Q5R952    800   NOC3L_PONAB Nucleolar complex protein 3 homol...1770.00001     52.8     28     46GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
8Q8VI84    807   NOC3L_MOUSE Nucleolar complex protein 3 homol...1750.00003     52     26     45GO:0016607; C:nuclear speck; IDA:MGI.::GO:0005730; C:nucleolus; IDA:MGI.
GO:0005488; F:binding; IEA:InterPro.
GO:0045444; P:fat cell differentiation; IMP:MGI.
9Q4VBT2    525   NOC4L_DANRE Nucleolar complex protein 4 homol...1620.00004     51.2     30     43GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
10O94372    485   YG06_SCHPO Uncharacterized protein C1604.06c ...2330.0001     49.7     24     42GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0032040; C:small-subunit processome; ISS:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
11Q91Y26    800   NOC3L_CRIGR Nucleolar complex protein 3 homol...1750.0001     50.1     26     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
12Q06512    552   NOC4_YEAST Nucleolar complex protein 4 OS=Sac...1820.0002     48.9     24     45GO:0030692; C:Noc4p-Nop14p complex; IPI:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.
13Q9VI82    822   NOC3L_DROME Nucleolar complex protein 3 homol...1640.0003     48.5     28     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
14Q6DRN3    800   NOC3L_DANRE Nucleolar complex protein 3 homol...1250.0005     48.1     28     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0007517; P:muscle organ development; IMP:ZFIN.::GO:0019216; P:regulation of lipid metabolic process; IMP:ZFIN.
15Q5ZJC7    508   NOC4L_CHICK Nucleolar complex protein 4 homol...1440.0007     47     26     43GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
16Q5I0I8    516   NOC4L_RAT Nucleolar complex protein 4 homolog...1780.002     45.8     25     40GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
17Q5XGZ8    795   NOC3L_XENLA Nucleolar complex protein 3 homol...1110.002     46.2     28     47GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
18Q8BHY2    516   NOC4L_MOUSE Nucleolar complex protein 4 homol...1780.002     45.4     25     40GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
19Q9BVI4    516   NOC4L_HUMAN Nucleolar complex protein 4 homol...1460.003     45.1     27     40GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0006364; P:rRNA processing; ISS:UniProtKB.
20Q6NRQ2    526   NOC41_XENLA Nucleolar complex protein 4 homol...1460.076     40.4     26     40GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
21Q6NU91    525   NOC4B_XENLA Nucleolar complex protein 4 homol...1460.28     38.9     25     40GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
22Q18DN4    9159   HMU_HALWD Halomucin OS=Haloquadratum walsbyi ...1307.8     34.3     24     44GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:InterPro.
GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0030246; F:carbohydrate binding; IEA:InterPro.::GO:0004180; F:carboxypeptidase activity; IEA:InterPro.
GO:0007156; P:homophilic cell adhesion; IEA:InterPro.
23P91136    778   NOC3L_CAEEL Nucleolar complex protein 3 homol...2463.2     35.4     26     41GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0018991; P:oviposition; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.
24P57368    307   Y281_BUCAI Uncharacterized transporter BU281 ...603.2     35     35     55GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0006810; P:transport; IEA:UniProtKB-KW.
25C4XIN9    1369   RPOB_DESMR DNA-directed RNA polymerase subuni...1187.8     34.3     26     47
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
26B1YK80    378   Y680_EXIS2 UPF0754 membrane protein Exig_0680...1358.2     33.9     26     45GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
27Q60675    3106   LAMA2_MOUSE Laminin subunit alpha-2 OS=Mus mu...1519.3     33.9     23     46GO:0005606; C:laminin-1 complex; IEA:InterPro.
GO:0005102; F:receptor binding; IEA:InterPro.
GO:0007155; P:cell adhesion; IEA:UniProtKB-KW.::GO:0030155; P:regulation of cell adhesion; IEA:InterPro.::GO:0030334; P:regulation of cell migration; IEA:InterPro.::GO:0045995; P:regulation of embryonic development; IEA:InterPro.
records
Previous ‹‹ ›› Next Total records: 27 1 - 27
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::