Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR034C-D
Length:
1770
Number of sequences:
5887
Description:
YDR034C-D YDR034C-D SGDID:S000007345, Chr IV from 518062-514043,519356-518064, Genome Release 64-1-1, reverse complement, transposable_element_gene, "Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61P0CX73    440   YP11A_YEAST Transposon Ty1-PL Gag polyprotein...4354e-128     414     51     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
62P0CX72    440   YL12A_YEAST Transposon Ty1-LR2 Gag polyprotei...4354e-128     414     51     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
63P0CX71    440   YE11A_YEAST Transposon Ty1-ER1 Gag polyprotei...4354e-128     414     51     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
64P0CX70    440   YD15A_YEAST Transposon Ty1-DR6 Gag polyprotei...4354e-128     414     51     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
65Q04706    440   YM11A_YEAST Transposon Ty1-ML1 Gag polyprotei...4361e-127     412     51     67GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
66Q6Q5H1    440   YP14A_YEAST Transposon Ty1-PR3 Gag polyprotei...4355e-127     410     51     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
67Q12441    440   YD12A_YEAST Transposon Ty1-DR3 Gag polyprotei...4367e-127     410     51     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
68P0CX69    440   YM14A_YEAST Transposon Ty1-MR2 Gag polyprotei...4367e-127     410     51     67GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
69P0CX68    440   YL11A_YEAST Transposon Ty1-LR1 Gag polyprotei...4367e-127     410     51     67GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
70P0CX67    440   YG13A_YEAST Transposon Ty1-GR3 Gag polyprotei...4367e-127     410     51     67GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
71P0CX66    440   YE12A_YEAST Transposon Ty1-ER2 Gag polyprotei...4367e-127     410     51     67GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
72P0CX65    440   YD14A_YEAST Transposon Ty1-DR5 Gag polyprotei...4367e-127     410     51     67GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
73Q03856    440   YD11A_YEAST Transposon Ty1-DR1 Gag polyprotei...4368e-127     410     51     67GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
74P0CX76    440   YM12A_YEAST Transposon Ty1-ML2 Gag polyprotei...4351e-126     409     51     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
75P0CX75    440   YL13A_YEAST Transposon Ty1-LR3 Gag polyprotei...4351e-126     409     51     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
76P0CX74    440   YJ11A_YEAST Transposon Ty1-JR1 Gag polyprotei...4351e-126     409     51     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
77P0C2I8    440   YL14A_YEAST Transposon Ty1-LR4 Gag polyprotei...4356e-126     407     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
78P0CX60    440   YP13A_YEAST Transposon Ty1-PR2 Gag polyprotei...4366e-126     407     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
79P0CX59    440   YO12A_YEAST Transposon Ty1-OR Gag polyprotein...4366e-126     407     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
80Q12470    440   YN12A_YEAST Transposon Ty1-NL2 Gag polyprotei...4351e-125     407     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
81Q12217    440   YB12A_YEAST Transposon Ty1-BR Gag polyprotein...4362e-125     406     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
82Q92392    440   YO11A_YEAST Transposon Ty1-OL Gag polyprotein...4365e-125     405     50     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
83P0CX58    440   YP12A_YEAST Transposon Ty1-PR1 Gag polyprotei...4359e-123     399     50     65GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
84P0CX57    440   YA11A_YEAST Transposon Ty1-A Gag polyprotein ...4359e-123     399     50     65GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
85P47099    440   YJ12A_YEAST Transposon Ty1-JR2 Gag polyprotei...4352e-121     395     49     65GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
86Q12085    440   YG11A_YEAST Transposon Ty1-GR1 Gag polyprotei...4353e-121     394     49     65GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
87P0C2I4    478   YH11A_YEAST Transposon Ty1-H Gag polyprotein ...4757e-121     395     47     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
88Q12391    440   YN11A_YEAST Transposon Ty1-NL1 Gag polyprotei...4354e-119     388     49     64GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
89Q03964    440   YD17A_YEAST Transposon Ty1-DR2 Gag polyprotei...4352e-112     369     47     63GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
90Q04215    440   YM13A_YEAST Transposon Ty1-MR1 Gag polyprotei...4352e-108     358     46     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
91Q12266    440   YB11A_YEAST Transposon Ty1-BL Gag polyprotein...4351e-107     356     46     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
records
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