Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR030C
Length:
506
Number of sequences:
5887
Description:
YDR030C RAD28 SGDID:S000002437, Chr IV from 503273-501753, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein involved in DNA repair, related to the human CSA protein that is involved in transcription-coupled repair nucleotide excision repair"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
91Q9XF57    317   PEX7_ARATH Peroxisome biogenesis protein 7 OS...1090.11     38.5     30     46GO:0005778; C:peroxisomal membrane; IEA:UniProtKB-SubCell.
GO:0005053; F:peroxisome matrix targeting signal-2 binding; IEA:InterPro.::GO:0004872; F:receptor activity; IEA:UniProtKB-KW.
GO:0016558; P:protein import into peroxisome matrix; IEA:InterPro.
92Q9UTN4    509   PFS2_SCHPO Polyadenylation factor subunit 2 O...2630.001     45.1     22     39GO:0005829; C:cytosol; IDA:PomBase.::GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:PomBase.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0006379; P:mRNA cleavage; ISS:PomBase.::GO:0006378; P:mRNA polyadenylation; ISS:PomBase.::GO:2000045; P:regulation of G1/S transition of mitotic cell cycle; IMP:PomBase.
93Q6CB13    565   MDV1_YARLI Mitochondrial division protein 1 O...1870.77     36.2     24     42GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
94Q54MP8    2200   Y5837_DICDI Bromodomain and WD repeat-contain...2230.002     45.1     27     42
95Q54W52    463   WDR12_DICDI Ribosome biogenesis protein WDR12...1530.002     44.7     24     47GO:0005730; C:nucleolus; ISS:dictyBase.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0042273; P:ribosomal large subunit biogenesis; ISS:dictyBase.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
96Q59WJ4    543   PFS2_CANAL Polyadenylation factor subunit 2 O...1270.002     44.3     23     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
97P42841    465   PFS2_YEAST Polyadenylation factor subunit 2 O...1370.41     37     21     44GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:SGD.
GO:0006379; P:mRNA cleavage; IDA:SGD.::GO:0006378; P:mRNA polyadenylation; IDA:SGD.
98O22468    415   MSI2_ARATH WD-40 repeat-containing protein MS...2470.003     43.9     23     36GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
99Q4X1Y0    510   PFS2_ASPFU Polyadenylation factor subunit 2 O...2050.003     43.9     20     37GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
100Q12024    460   YTM1_YEAST Ribosome biogenesis protein YTM1 O...1470.003     43.9     24     43GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; IDA:SGD.::GO:0030687; C:preribosome, large subunit precursor; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0051276; P:chromosome organization; IGI:SGD.::GO:0042273; P:ribosomal large subunit biogenesis; IMP:SGD.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
101A6ZPA9    460   YTM1_YEAS7 Ribosome biogenesis protein YTM1 O...1470.003     43.9     24     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
102Q9CAA0    920   COB21_ARATH Coatomer subunit beta'-1 OS=Arabi...2740.003     44.3     21     38GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
103B4JPT9    419   WDR12_DROGR Ribosome biogenesis protein WDR12...1300.003     43.5     29     45GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
104Q5BJ90    423   WDR12_XENTR Ribosome biogenesis protein wdr12...711.9     34.7     31     49GO:0005654; C:nucleoplasm; ISS:UniProtKB.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.::GO:0030687; C:preribosome, large subunit precursor; ISS:UniProtKB.
GO:0008283; P:cell proliferation; ISS:UniProtKB.::GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
105Q6BVZ3    504   PFS2_DEBHA Polyadenylation factor subunit 2 O...2010.003     43.9     21     40GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
106Q4I7L0    423   HAT2_GIBZE Histone acetyltransferase type B s...1201.3     35.4     21     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
107Q8YTC2    1258   Y2800_NOSS1 Uncharacterized WD repeat-contain...1680.22     38.1     26     41
GO:0043531; F:ADP binding; IEA:InterPro.
GO:0006952; P:defense response; IEA:InterPro.
108Q8L828    909   COB23_ARATH Coatomer subunit beta'-3 OS=Arabi...2780.004     43.9     22     37GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
109Q6CU59    444   YTM1_KLULA Ribosome biogenesis protein YTM1 O...1470.004     43.5     23     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
110A3LWH8    514   YD156_PICST WD repeat-containing protein PICS...2330.004     43.5     23     43
111A8XL02    446   WDR12_CAEBR Ribosome biogenesis protein WDR12...1470.004     43.1     24     42GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
112O14021    431   PRW1_SCHPO RbAp48-related WD40 repeat-contain...1440.005     43.1     26     40GO:0005829; C:cytosol; IDA:PomBase.::GO:0033698; C:Rpd3L complex; IDA:PomBase.::GO:0070210; C:Rpd3L-Expanded complex; IDA:PomBase.::GO:0032221; C:Rpd3S complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0006338; P:chromatin remodeling; IC:PomBase.::GO:0006342; P:chromatin silencing; ISS:PomBase.::GO:0030261; P:chromosome condensation; IMP:PomBase.::GO:0016575; P:histone deacetylation; IMP:PomBase.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
113Q2TZG4    610   PFS2_ASPOR Polyadenylation factor subunit 2 O...2110.005     43.1     19     37GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
114O22469    424   MSI3_ARATH WD-40 repeat-containing protein MS...2550.005     42.7     22     35GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
115Q6CSI1    408   HAT2_KLULA Histone acetyltransferase type B s...1960.005     42.7     23     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
116O94527    809   YBU3_SCHPO Uncharacterized WD repeat-containi...1320.006     43.1     29     45GO:0005829; C:cytosol; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
117Q54YD8    1005   COPB2_DICDI Coatomer subunit beta' OS=Dictyos...2610.006     43.1     21     38GO:0030126; C:COPI vesicle coat; ISS:dictyBase.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.
118B2VZH2    460   YTM1_PYRTR Ribosome biogenesis protein ytm1 O...1300.006     42.7     20     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
119D1ZEB4    460   LIS11_SORMK Nuclear distribution protein PAC1...1480.006     42.7     20     40GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
120Q4R8E7    415   WDR69_MACFA Outer row dynein assembly protein...1107     32.7     25     40GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
121O35142    905   COPB2_RAT Coatomer subunit beta' OS=Rattus no...2650.007     42.7     20     39GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005080; F:protein kinase C binding; IPI:RGD.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
records
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