Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR030C
Length:
506
Number of sequences:
5887
Description:
YDR030C RAD28 SGDID:S000002437, Chr IV from 503273-501753, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein involved in DNA repair, related to the human CSA protein that is involved in transcription-coupled repair nucleotide excision repair"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
481Q6GPU3    711   DTLB_XENLA Denticleless protein homolog B OS=...1354.9     33.5     22     40GO:0005813; C:centrosome; ISS:UniProtKB.::GO:0031464; C:Cul4A-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0031465; C:Cul4B-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0031572; P:G2/M transition DNA damage checkpoint; ISS:UniProtKB.::GO:0006513; P:protein monoubiquitination; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; ISS:UniProtKB.::GO:0009411; P:response to UV; ISS:UniProtKB.::GO:0019985; P:translesion synthesis; ISS:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
482A5GFN6    368   RAEL1_PIG mRNA export factor OS=Sus scrofa (P...664.9     33.5     30     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
483Q5UPD3    496   YR061_MIMIV Putative BTB/POZ domain and WD-re...1494.9     33.5     28     48
484Q8C570    368   RAE1L_MOUSE mRNA export factor OS=Mus musculu...665     33.1     30     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0071407; P:cellular response to organic cyclic compound; IDA:MGI.
485Q54MT0    331   EIF3I_DICDI Eukaryotic translation initiation...795.2     33.1     29     46GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:dictyBase.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0006446; P:regulation of translational initiation; ISS:dictyBase.
486Q5EA99    392   PK1IP_BOVIN p21-activated protein kinase-inte...855.2     33.1     26     47GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0009968; P:negative regulation of signal transduction; IEA:UniProtKB-KW.
487Q7Z4S6    1674   KI21A_HUMAN Kinesin-like protein KIF21A OS=Ho...1275.3     33.5     23     42GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003777; F:microtubule motor activity; IEA:InterPro.
GO:0007018; P:microtubule-based movement; IEA:InterPro.
488O60907    577   TBL1X_HUMAN F-box-like/WD repeat-containing p...625.4     33.5     39     50GO:0005876; C:spindle microtubule; IDA:UniProtKB.::GO:0017053; C:transcriptional repressor complex; IDA:UniProtKB.
GO:0008013; F:beta-catenin binding; IPI:UniProtKB.::GO:0042393; F:histone binding; IDA:UniProtKB.::GO:0008022; F:protein C-terminus binding; IPI:UniProtKB.::GO:0019904; F:protein domain specific binding; IPI:UniProtKB.::GO:0003714; F:transcription corepressor activity; IDA:UniProtKB.::GO:0008134; F:transcription factor binding; IPI:UniProtKB.::GO:0044212; F:transcription regulatory region DNA binding; IDA:UniProtKB.
GO:0060070; P:canonical Wnt receptor signaling pathway; IMP:UniProtKB.::GO:0044255; P:cellular lipid metabolic process; TAS:Reactome.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0007219; P:Notch signaling pathway; TAS:Reactome.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.::GO:0007605; P:sensory perception of sound; IMP:UniProtKB.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
489Q3SWS8    368   RAE1L_RAT mRNA export factor OS=Rattus norveg...665.4     33.1     30     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
490Q12220    943   UTP12_YEAST U3 small nucleolar RNA-associated...805.5     33.5     28     46GO:0034388; C:Pwp2p-containing subcomplex of 90S preribosome; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0030515; F:snoRNA binding; IPI:SGD.
GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.
491Q96S15    920   WDR24_HUMAN WD repeat-containing protein 24 O...435.6     33.5     33     42
492Q16K15    326   EIF3I_AEDAE Eukaryotic translation initiation...1355.8     33.1     24     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
493Q86HX1    1114   HIRA_DICDI Protein HIRA OS=Dictyostelium disc...465.8     33.5     35     57GO:0005634; C:nucleus; ISS:dictyBase.
GO:0003682; F:chromatin binding; IEA:InterPro.::GO:0003714; F:transcription corepressor activity; ISS:dictyBase.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:dictyBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
494Q66HB3    777   IFT80_RAT Intraflagellar transport protein 80...515.8     33.5     31     49GO:0035085; C:cilium axoneme; IEA:UniProtKB-SubCell.::GO:0005932; C:microtubule basal body; IEA:UniProtKB-SubCell.
495Q229Z6    634   POC1_TETTS POC1 centriolar protein homolog OS...1655.9     33.1     24     46GO:0005929; C:cilium; IEA:UniProtKB-KW.::GO:0005932; C:microtubule basal body; IDA:UniProtKB.
GO:0030030; P:cell projection organization; IEA:UniProtKB-KW.::GO:0051297; P:centrosome organization; IMP:UniProtKB.
496Q8VD65    1358   PI3R4_MOUSE Phosphoinositide 3-kinase regulat...1446.1     33.5     23     42GO:0005770; C:late endosome; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004674; F:protein serine/threonine kinase activity; IEA:UniProtKB-KW.
497Q2UGK1    487   YTM1_ASPOR Ribosome biogenesis protein ytm1 O...1406.2     33.1     18     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
498P0C0R5    1358   PI3R4_RAT Phosphoinositide 3-kinase regulator...1446.2     33.5     23     42GO:0005770; C:late endosome; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004674; F:protein serine/threonine kinase activity; IEA:UniProtKB-KW.
499Q8VEJ4    485   NLE1_MOUSE Notchless protein homolog 1 OS=Mus...2256.2     33.1     22     40GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0001826; P:inner cell mass cell differentiation; IMP:MGI.::GO:0007219; P:Notch signaling pathway; IDA:MGI.
500Q8CFJ9    790   WDR24_MOUSE WD repeat-containing protein 24 O...436.3     33.1     33     42
501Q80ZK9    677   WDTC1_MOUSE WD and tetratricopeptide repeats ...936.4     33.1     24     40GO:0005829; C:cytosol; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI.
GO:0004857; F:enzyme inhibitor activity; IDA:MGI.::GO:0042393; F:histone binding; IPI:MGI.::GO:0042826; F:histone deacetylase binding; IPI:MGI.
GO:0055082; P:cellular chemical homeostasis; IMP:MGI.::GO:0032869; P:cellular response to insulin stimulus; IMP:MGI.::GO:0006006; P:glucose metabolic process; IMP:MGI.::GO:0001701; P:in utero embryonic development; IMP:MGI.::GO:0035264; P:multicellular organism growth; IMP:MGI.::GO:0045717; P:negative regulation of fatty acid biosynthetic process; IDA:MGI.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0008361; P:regulation of cell size; IMP:MGI.
502P93398    377   GBB2_TOBAC Guanine nucleotide-binding protein...796.4     33.1     25     44
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
503Q9FNZ1    443   C3H63_ARATH Zinc finger CCCH domain-containin...506.5     33.1     30     54
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
504P38262    535   SIF2_YEAST SIR4-interacting protein SIF2 OS=S...436.5     33.1     42     58GO:0070210; C:Rpd3L-Expanded complex; IDA:SGD.::GO:0034967; C:Set3 complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0016575; P:histone deacetylation; IDA:SGD.::GO:0031939; P:negative regulation of chromatin silencing at telomere; IMP:SGD.::GO:0045835; P:negative regulation of meiosis; IPI:SGD.::GO:0032874; P:positive regulation of stress-activated MAPK cascade; IMP:SGD.
505P93563    377   GBB_SOLTU Guanine nucleotide-binding protein ...796.5     33.1     25     44
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
506B4KE10    506   WDR55_DROMO WD repeat-containing protein 55 h...1257.5     32.7     29     44
507Q8TC44    478   POC1B_HUMAN POC1 centriolar protein homolog B...1516.9     33.1     25     44GO:0005814; C:centriole; IDA:UniProtKB.::GO:0005932; C:microtubule basal body; IDA:UniProtKB.
GO:0042384; P:cilium assembly; IMP:UniProtKB.
508Q6C553    1058   HIR1_YARLI Protein HIR1 OS=lipolytica). GN=HI...1806.9     33.1     23     37GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
509Q00659    678   SCONB_EMENI Probable E3 ubiquitin ligase comp...1366.9     33.1     24     43
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
510Q54UI3    467   WDR4_DICDI tRNA (guanine-N(7)-)-methyltransfe...667     33.1     41     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
511P38123    315   SWD3_YEAST COMPASS component SWD3 OS=Saccharo...1087.1     32.7     27     44GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0006348; P:chromatin silencing at telomere; IMP:SGD.::GO:0051568; P:histone H3-K4 methylation; IDA:SGD.::GO:0000723; P:telomere maintenance; IMP:SGD.
records
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