Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR030C
Length:
506
Number of sequences:
5887
Description:
YDR030C RAD28 SGDID:S000002437, Chr IV from 503273-501753, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein involved in DNA repair, related to the human CSA protein that is involved in transcription-coupled repair nucleotide excision repair"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
451Q4X0A9    696   SCONB_ASPFU Probable E3 ubiquitin ligase comp...1273.7     33.9     25     46
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
452B0XTS1    696   SCONB_ASPFC Probable E3 ubiquitin ligase comp...1273.7     33.9     25     46
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
453Q7T2F6    423   WSB1_DANRE WD repeat and SOCS box-containing ...2193.8     33.9     21     40
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
454Q5U2W5    800   TBL3_RAT Transducin beta-like protein 3 OS=Ra...2623.8     33.9     23     39GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0032040; C:small-subunit processome; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:InterPro.
455Q5ZMV7    313   WDR82_CHICK WD repeat-containing protein 82 O...2673.8     33.5     19     36GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
456Q9BZK7    514   TBL1R_HUMAN F-box-like/WD repeat-containing p...1633.9     33.9     23     42GO:0005876; C:spindle microtubule; IDA:UniProtKB.::GO:0017053; C:transcriptional repressor complex; IDA:UniProtKB.
GO:0008013; F:beta-catenin binding; IPI:UniProtKB.::GO:0042393; F:histone binding; IDA:UniProtKB.::GO:0047485; F:protein N-terminus binding; IPI:UniProtKB.::GO:0003714; F:transcription corepressor activity; IDA:UniProtKB.::GO:0044212; F:transcription regulatory region DNA binding; IDA:UniProtKB.
GO:0060070; P:canonical Wnt receptor signaling pathway; IMP:UniProtKB.::GO:0044255; P:cellular lipid metabolic process; TAS:Reactome.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0007219; P:Notch signaling pathway; TAS:Reactome.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
457Q610N4    492   TM104_CAEBR Transmembrane protein 104 homolog...784     33.9     32     51GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
458Q8BHJ5    514   TBL1R_MOUSE F-box-like/WD repeat-containing p...1634     33.9     23     42
GO:0003714; F:transcription corepressor activity; IMP:MGI.::GO:0044212; F:transcription regulatory region DNA binding; IDA:BHF-UCL.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:BHF-UCL.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
459A1DHW6    689   SCONB_NEOFI Probable E3 ubiquitin ligase comp...1274.1     33.9     25     46
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
460Q09373    507   FZY1_CAEEL WD repeat-containing protein fzy-1...1384.2     33.9     26     39GO:0000793; C:condensed chromosome; IDA:WormBase.::GO:0005737; C:cytoplasm; IDA:WormBase.
GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0008340; P:determination of adult lifespan; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0007091; P:mitotic metaphase/anaphase transition; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.
461A5DST9    491   YTM1_LODEL Ribosome biogenesis protein YTM1 O...1234.2     33.5     24     39GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
462A4RD35    1269   SEC31_MAGO7 Protein transport protein SEC31 O...1304.2     33.9     24     38GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
463A6H603    1563   NWD1_MOUSE NACHT and WD repeat domain-contain...964.3     33.9     26     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
464Q12363    437   WTM1_YEAST Transcriptional modulator WTM1 OS=...1444.3     33.5     24     36GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0003714; F:transcription corepressor activity; IDA:SGD.
GO:0051457; P:maintenance of protein location in nucleus; IMP:SGD.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:SGD.::GO:0006606; P:protein import into nucleus; IMP:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
465Q14137    746   BOP1_HUMAN Ribosome biogenesis protein BOP1 O...254.3     33.9     52     64GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0008283; P:cell proliferation; NAS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:UniProtKB.::GO:0051726; P:regulation of cell cycle; IMP:UniProtKB.
466Q9QXL2    1672   KI21A_MOUSE Kinesin-like protein KIF21A OS=Mu...1274.4     33.9     23     42GO:0030424; C:axon; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0030425; C:dendrite; IEA:UniProtKB-SubCell.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003777; F:microtubule motor activity; IEA:InterPro.
GO:0007018; P:microtubule-based movement; IEA:InterPro.
467Q5R1S9    566   CAF1B_CHICK Chromatin assembly factor 1 subun...564.4     33.5     32     48GO:0033186; C:CAF-1 complex; ISS:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0031497; P:chromatin assembly; ISS:UniProtKB.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
468Q9C1X1    854   PWP2_SCHPO Periodic tryptophan protein 2 homo...2454.5     33.9     20     36GO:0005829; C:cytosol; IDA:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:PomBase.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
469Q38884    328   EIF3I_ARATH Eukaryotic translation initiation...684.6     33.5     38     53GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005829; C:cytosol; IDA:TAIR.
GO:0005515; F:protein binding; IPI:TAIR.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0046686; P:response to cadmium ion; IEP:TAIR.::GO:0009651; P:response to salt stress; IEP:TAIR.
470Q7ZWF0    368   RAE1L_DANRE mRNA export factor OS=Danio rerio...664.6     33.5     32     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
471Q5F3X8    1227   SC31A_CHICK Protein transport protein Sec31A ...1454.6     33.9     26     43GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
472Q9W1J3    655   GAD1_DROME Gastrulation defective protein 1 h...1304.6     33.5     26     44
473Q55DM1    3619   LVSA_DICDI BEACH domain-containing protein lv...1164.6     33.9     27     46GO:0031164; C:contractile vacuolar membrane; IDA:dictyBase.::GO:0005624; C:membrane fraction; IDA:dictyBase.::GO:0005625; C:soluble fraction; IDA:dictyBase.
GO:0005543; F:phospholipid binding; IDA:dictyBase.
GO:0007155; P:cell adhesion; IMP:dictyBase.::GO:0006874; P:cellular calcium ion homeostasis; IMP:dictyBase.::GO:0033298; P:contractile vacuole organization; IMP:dictyBase.::GO:0000915; P:cytokinesis, actomyosin contractile ring assembly; IMP:dictyBase.::GO:0007032; P:endosome organization; IMP:dictyBase.::GO:0007041; P:lysosomal transport; ISS:dictyBase.::GO:0006909; P:phagocytosis; IMP:dictyBase.
474Q9WUM4    474   COR1C_MOUSE Coronin-1C OS=Mus musculus (Mouse...914.7     33.5     27     45GO:0015629; C:actin cytoskeleton; IBA:RefGenome.
GO:0051015; F:actin filament binding; IBA:RefGenome.
GO:0000147; P:actin cortical patch assembly; TAS:MGI.::GO:0006909; P:phagocytosis; TAS:MGI.
475Q6GL39    313   WDR82_XENTR WD repeat-containing protein 82 O...2674.7     33.1     18     37GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
476D4AM37    663   SCONB_ARTBC Probable E3 ubiquitin ligase comp...1244.7     33.5     27     46
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
477B4M4W4    504   WDR55_DROVI WD repeat-containing protein 55 h...507.5     32.7     34     62
478B4N984    504   WDR55_DROWI WD repeat-containing protein 55 h...1244.8     33.5     27     42
479D4D8P3    663   SCONB_TRIVH Probable E3 ubiquitin ligase comp...1244.9     33.5     27     46
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
480Q9ULV4    474   COR1C_HUMAN Coronin-1C OS=Homo sapiens (Human...914.9     33.5     27     45GO:0015629; C:actin cytoskeleton; IBA:RefGenome.
GO:0051015; F:actin filament binding; IBA:RefGenome.
GO:0030036; P:actin cytoskeleton organization; IBA:RefGenome.::GO:0006909; P:phagocytosis; TAS:ProtInc.::GO:0007165; P:signal transduction; TAS:ProtInc.
481Q6GPU3    711   DTLB_XENLA Denticleless protein homolog B OS=...1354.9     33.5     22     40GO:0005813; C:centrosome; ISS:UniProtKB.::GO:0031464; C:Cul4A-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0031465; C:Cul4B-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0031572; P:G2/M transition DNA damage checkpoint; ISS:UniProtKB.::GO:0006513; P:protein monoubiquitination; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; ISS:UniProtKB.::GO:0009411; P:response to UV; ISS:UniProtKB.::GO:0019985; P:translesion synthesis; ISS:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
records
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