Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR030C
Length:
506
Number of sequences:
5887
Description:
YDR030C RAD28 SGDID:S000002437, Chr IV from 503273-501753, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein involved in DNA repair, related to the human CSA protein that is involved in transcription-coupled repair nucleotide excision repair"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
421B4QTL6    498   WDR55_DROSI WD repeat-containing protein 55 h...322.4     34.7     50     66
422A6ZQL5    714   MDV1_YEAS7 Mitochondrial division protein 1 O...772.8     34.3     34     51GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
423O14053    902   YC47_SCHPO Uncharacterized WD repeat-containi...1102.4     34.7     24     45GO:0032153; C:cell division site; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005730; C:nucleolus; NAS:PomBase.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:PomBase.::GO:0032040; C:small-subunit processome; IEA:InterPro.::GO:0005816; C:spindle pole body; IDA:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
424Q16MY0    659   WDR48_AEDAE WD repeat-containing protein 48 h...1732.5     34.7     26     40
425Q58E77    313   WD82B_XENLA WD repeat-containing protein 82-B...2672.5     34.3     19     37GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
426Q9BQ87    522   TBL1Y_HUMAN F-box-like/WD repeat-containing p...572.6     34.3     40     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
427Q99570    1358   PI3R4_HUMAN Phosphoinositide 3-kinase regulat...1442.6     34.7     23     42GO:0005829; C:cytosol; TAS:Reactome.::GO:0005770; C:late endosome; IDA:UniProtKB.
GO:0005524; F:ATP binding; NAS:UniProtKB.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004674; F:protein serine/threonine kinase activity; IEA:UniProtKB-KW.
GO:0045087; P:innate immune response; TAS:Reactome.::GO:0008286; P:insulin receptor signaling pathway; TAS:Reactome.
428Q8TEQ6    1508   GEMI5_HUMAN Gem-associated protein 5 OS=Homo ...642.6     34.7     27     47GO:0015030; C:Cajal body; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0017069; F:snRNA binding; IDA:UniProtKB.
GO:0034660; P:ncRNA metabolic process; TAS:Reactome.::GO:0006461; P:protein complex assembly; TAS:UniProtKB.::GO:0000387; P:spliceosomal snRNP assembly; TAS:UniProtKB.
429O22212    554   PRP4_ARATH U4/U6 small nuclear ribonucleoprot...1122.6     34.3     28     41GO:0016607; C:nuclear speck; IDA:TAIR.
GO:0001709; P:cell fate determination; IMP:TAIR.::GO:0007267; P:cell-cell signaling; IMP:TAIR.::GO:0009560; P:embryo sac egg cell differentiation; IMP:TAIR.::GO:0008380; P:RNA splicing; IEA:InterPro.
430Q8WUA4    911   TF3C2_HUMAN General transcription factor 3C p...422.7     34.7     31     55GO:0000127; C:transcription factor TFIIIC complex; IDA:HGNC.
GO:0042791; P:5S class rRNA transcription from RNA polymerase III type 1 promoter; IC:HGNC.::GO:0042797; P:tRNA transcription from RNA polymerase III promoter; IC:HGNC.
431Q7ZX22    780   WDR24_XENLA WD repeat-containing protein 24 O...1328.8     32.7     23     41
432Q8MY12    780   MHCKC_DICDI Myosin heavy chain kinase C OS=Di...784.4     33.9     32     46GO:0005826; C:actomyosin contractile ring; IDA:dictyBase.::GO:0032154; C:cleavage furrow; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IC:dictyBase.::GO:0016905; F:myosin heavy chain kinase activity; IMP:dictyBase.::GO:0045159; F:myosin II binding; ISS:dictyBase.
GO:0000910; P:cytokinesis; IMP:dictyBase.::GO:0031037; P:myosin II filament disassembly; IMP:dictyBase.::GO:0018107; P:peptidyl-threonine phosphorylation; IDA:dictyBase.
433Q29RZ2    644   PPWD1_BOVIN Peptidylprolyl isomerase domain a...2482.7     34.3     22     44
GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006457; P:protein folding; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
434C5FP68    674   SCONB_ARTOC Probable E3 ubiquitin ligase comp...1252.7     34.3     26     47
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
435Q9QXE7    527   TBL1X_MOUSE F-box-like/WD repeat-containing p...572.8     34.3     40     51GO:0005667; C:transcription factor complex; IDA:MGI.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0005515; F:protein binding; IPI:MGI.::GO:0003714; F:transcription corepressor activity; IMP:MGI.::GO:0044212; F:transcription regulatory region DNA binding; IDA:BHF-UCL.
GO:0045444; P:fat cell differentiation; IMP:MGI.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IMP:MGI.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:BHF-UCL.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IMP:MGI.::GO:0043627; P:response to estrogen stimulus; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
436P90648    732   MHCKB_DICDI Myosin heavy chain kinase B OS=Di...1083.1     34.3     22     46GO:0005826; C:actomyosin contractile ring; IDA:dictyBase.
GO:0005524; F:ATP binding; IC:dictyBase.::GO:0016905; F:myosin heavy chain kinase activity; IDA:dictyBase.::GO:0045159; F:myosin II binding; IPI:dictyBase.
GO:0000910; P:cytokinesis; IMP:dictyBase.::GO:0031037; P:myosin II filament disassembly; IMP:dictyBase.::GO:0018107; P:peptidyl-threonine phosphorylation; IDA:dictyBase.::GO:0046777; P:protein autophosphorylation; IDA:dictyBase.
437Q7ZVL2    779   WDR24_DANRE WD repeat-containing protein 24 O...463.1     34.3     35     48
438Q54DS4    1823   Y2056_DICDI WD repeat-containing protein DDB_...1123.1     34.3     27     42
439Q5ZMV9    705   WDR24_CHICK WD repeat-containing protein 24 O...433.1     34.3     35     44
440Q19124    578   A16L1_CAEEL Autophagic-related protein 16.1 O...2113.5     33.9     22     39
441Q9C2I5    487   YTM1_NEUCR Ribosome biogenesis protein ytm-1 ...1273.3     33.9     20     39GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
442B4JSW8    503   WDR55_DROGR WD repeat-containing protein 55 h...1253.3     33.9     29     44
443Q6BU94    417   PRP46_DEBHA Pre-mRNA-splicing factor PRP46 OS...1163.3     33.9     27     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
444Q9C270    899   PWP2_NEUCR Periodic tryptophan protein 2 homo...2293.4     34.3     20     38
445Q54QU5    359   WDR89_DICDI WD repeat-containing protein 89 h...1453.4     33.9     23     43
446Q9Z2Q1    1249   SC31A_RAT Protein transport protein Sec31A OS...2363.4     34.3     22     41GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0005768; C:endosome; IDA:RGD.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
447Q1DJF7    465   YTM1_COCIM Ribosome biogenesis protein YTM1 O...1713.5     33.9     18     41GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
448Q5RDC3    911   TF3C2_PONAB General transcription factor 3C p...433.5     34.3     30     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
449O54927    421   WSB1_MOUSE WD repeat and SOCS box-containing ...1453.6     33.9     26     43
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
450O93277    609   WDR1_CHICK WD repeat-containing protein 1 OS=...443.6     33.9     36     45GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
451Q4X0A9    696   SCONB_ASPFU Probable E3 ubiquitin ligase comp...1273.7     33.9     25     46
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
records
Previous ‹‹ ›› Next Total records: 535 421 - 450
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::