Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR030C
Length:
506
Number of sequences:
5887
Description:
YDR030C RAD28 SGDID:S000002437, Chr IV from 503273-501753, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein involved in DNA repair, related to the human CSA protein that is involved in transcription-coupled repair nucleotide excision repair"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
391Q6UXN9    313   WDR82_HUMAN WD repeat-containing protein 82 O...2671.7     34.7     19     37GO:0000785; C:chromatin; IDA:UniProtKB.::GO:0072357; C:PTW/PP1 phosphatase complex; IDA:UniProtKB.::GO:0048188; C:Set1C/COMPASS complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0051568; P:histone H3-K4 methylation; IDA:UniProtKB.
392Q9W7F2    607   WDR1A_XENLA WD repeat-containing protein 1-A ...441.7     35     41     45GO:0005884; C:actin filament; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0005886; C:plasma membrane; IDA:UniProtKB.
GO:0003779; F:actin binding; ISS:UniProtKB.
GO:0030043; P:actin filament fragmentation; IDA:UniProtKB.
393Q8I0F4    419   LIS1_DICDI Lissencephaly-1 homolog OS=Dictyos...1361.7     35     24     45GO:0031592; C:centrosomal corona; IDA:dictyBase.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.
GO:0045504; F:dynein heavy chain binding; IPI:dictyBase.::GO:0017048; F:Rho GTPase binding; IPI:dictyBase.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0051642; P:centrosome localization; IMP:dictyBase.::GO:0051645; P:Golgi localization; IMP:dictyBase.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
394Q9Z1Z2    350   STRAP_MOUSE Serine-threonine kinase receptor-...1881.7     34.7     21     39GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005102; F:receptor binding; IDA:MGI.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0030512; P:negative regulation of transforming growth factor beta receptor signaling pathway; IDA:MGI.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
395Q8C4J7    801   TBL3_MOUSE Transducin beta-like protein 3 OS=...2601.8     35     22     39GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0032040; C:small-subunit processome; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:InterPro.
396Q21624    607   CORO_CAEEL Coronin-like protein cor-1 OS=Caen...1071.8     35     25     45GO:0015629; C:actin cytoskeleton; IBA:RefGenome.
GO:0051015; F:actin filament binding; IBA:RefGenome.
GO:0030036; P:actin cytoskeleton organization; IBA:RefGenome.::GO:0007126; P:meiosis; IMP:WormBase.
397Q8IZU2    1322   WDR17_HUMAN WD repeat-containing protein 17 O...1281.8     35     25     43
398Q6FT96    711   MDV1_CANGA Mitochondrial division protein 1 O...1392.6     34.7     27     41GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
399Q54S79    942   WDR3_DICDI WD repeat-containing protein 3 hom...1261.9     35     24     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
400A1CXL0    488   YTM1_NEOFI Ribosome biogenesis protein ytm1 O...1402     34.7     19     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
401Q64LD2    544   WDR25_HUMAN WD repeat-containing protein 25 O...1282     34.7     26     41
402P43254    675   COP1_ARATH E3 ubiquitin-protein ligase COP1 O...1213.4     33.9     21     40GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000152; C:nuclear ubiquitin ligase complex; TAS:TAIR.
GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0046283; P:anthocyanin metabolic process; IMP:TAIR.::GO:0006281; P:DNA repair; IMP:TAIR.::GO:0009649; P:entrainment of circadian clock; IMP:TAIR.::GO:0009640; P:photomorphogenesis; IGI:TAIR.::GO:0048573; P:photoperiodism, flowering; IMP:TAIR.::GO:0009585; P:red, far-red light phototransduction; IEA:UniProtKB-KW.::GO:0010119; P:regulation of stomatal movement; IMP:TAIR.::GO:0009641; P:shade avoidance; IMP:TAIR.::GO:0009647; P:skotomorphogenesis; TAS:TAIR.
403B2B5V0    487   YTM1_PODAN Ribosome biogenesis protein YTM1 O...1282.1     34.7     23     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
404A5DAQ7    573   YD156_PICGU WD repeat-containing protein PGUG...1882.1     34.7     24     40
405Q01369    316   GBLP_NEUCR Guanine nucleotide-binding protein...3342.1     34.3     21     40
406Q6NPN9    350   DWA2_ARATH WD repeat-containing protein DWA2 ...1332.2     34.3     26     37GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0009738; P:abscisic acid mediated signaling pathway; IEA:UniProtKB-KW.::GO:0009788; P:negative regulation of abscisic acid mediated signaling pathway; IMP:UniProtKB.::GO:0016567; P:protein ubiquitination; IMP:UniProtKB.
407Q8CBE3    496   WDR37_MOUSE WD repeat-containing protein 37 O...1022.2     34.7     27     46
408Q8T088    498   WDR55_DROME WD repeat-containing protein 55 h...322.2     34.7     50     66
409Q6FKK3    457   YTM1_CANGA Ribosome biogenesis protein YTM1 O...1352.3     34.7     22     41GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
410Q9VZF4    1326   FBXW7_DROME F-box/WD repeat-containing protei...2342.3     34.7     24     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0019005; C:SCF ubiquitin ligase complex; NAS:FlyBase.
GO:0030332; F:cyclin binding; TAS:FlyBase.
GO:0007411; P:axon guidance; IMP:FlyBase.::GO:0008054; P:cyclin catabolic process; TAS:FlyBase.::GO:0042023; P:DNA endoreduplication; IMP:FlyBase.::GO:0060253; P:negative regulation of glial cell proliferation; IGI:FlyBase.::GO:0045926; P:negative regulation of growth; IMP:FlyBase.::GO:0007096; P:regulation of exit from mitosis; TAS:FlyBase.::GO:0007088; P:regulation of mitosis; IMP:FlyBase.::GO:0030162; P:regulation of proteolysis; TAS:FlyBase.
411Q4WVS4    658   MDV1_ASPFU Mitochondrial division protein 1 O...1662.3     34.7     25     40GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
412Q39836    325   GBLP_SOYBN Guanine nucleotide-binding protein...1792.3     34.3     26     43
413Q5R650    495   WDR37_PONAB WD repeat-containing protein 37 O...1022.3     34.7     27     46
414A1DDL6    658   MDV1_NEOFI Mitochondrial division protein 1 O...1662.3     34.7     25     40GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
415C5FWH1    461   LIS1_ARTOC Nuclear distribution protein PAC1 ...1252.3     34.7     26     40GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
416Q8N1V2    620   WDR16_HUMAN WD repeat-containing protein 16 O...2092.3     34.7     21     39GO:0005737; C:cytoplasm; IDA:HPA.::GO:0043231; C:intracellular membrane-bounded organelle; IDA:HPA.
GO:0005515; F:protein binding; IPI:UniProtKB.
417Q11176    611   WDR1_CAEEL Actin-interacting protein 1 OS=Cae...1492.4     34.7     21     43GO:0042643; C:actomyosin, actin part; IDA:WormBase.::GO:0030016; C:myofibril; IDA:WormBase.::GO:0016528; C:sarcoplasm; IDA:WormBase.
GO:0051015; F:actin filament binding; IDA:WormBase.
GO:0051016; P:barbed-end actin filament capping; ISS:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0018991; P:oviposition; IMP:WormBase.::GO:0030836; P:positive regulation of actin filament depolymerization; IDA:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0040017; P:positive regulation of locomotion; IMP:WormBase.
418P93397    377   GBB1_TOBAC Guanine nucleotide-binding protein...792.4     34.3     27     44
GO:0005515; F:protein binding; IPI:IntAct.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
419Q8CEC6    646   PPWD1_MOUSE Peptidylprolyl isomerase domain a...2482.4     34.7     21     44
GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006457; P:protein folding; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
420Q9Y2I8    494   WDR37_HUMAN WD repeat-containing protein 37 O...1022.4     34.7     27     46
421B4QTL6    498   WDR55_DROSI WD repeat-containing protein 55 h...322.4     34.7     50     66
records
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