Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR030C
Length:
506
Number of sequences:
5887
Description:
YDR030C RAD28 SGDID:S000002437, Chr IV from 503273-501753, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein involved in DNA repair, related to the human CSA protein that is involved in transcription-coupled repair nucleotide excision repair"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
331B0W517    425   WDR12_CULQU Ribosome biogenesis protein WDR12...1480.72     36.2     26     46GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
332Q7ZUV2    694   KTNB1_DANRE Katanin p80 WD40-containing subun...1362.8     34.3     24     43GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
333B3P4F8    498   WDR55_DROER WD repeat-containing protein 55 h...1332.2     34.7     31     44
334Q5E959    350   STRAP_BOVIN Serine-threonine kinase receptor-...1880.76     35.8     21     39GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
335Q2HHH2    524   YD156_CHAGB WD repeat-containing protein CHGG...1310.77     36.2     24     43
336A7TMF9    453   YTM1_VANPO Ribosome biogenesis protein YTM1 O...1340.78     35.8     22     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
337B4PU14    499   WDR55_DROYA WD repeat-containing protein 55 h...1336.8     33.1     30     44
338Q756D0    445   YTM1_ASHGO Ribosome biogenesis protein YTM1 O...1470.8     35.8     22     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
339Q59Y20    724   DSE1_CANAL Protein DSE1 OS=Candida albicans (...390.8     36.2     36     64GO:0009277; C:fungal-type cell wall; ISS:CGD.
GO:0042710; P:biofilm formation; IMP:CGD.::GO:0007155; P:cell adhesion; IMP:CGD.::GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007047; P:cellular cell wall organization; IEA:UniProtKB-KW.::GO:0030447; P:filamentous growth; IMP:CGD.::GO:0009405; P:pathogenesis; IMP:CGD.
340Q6CMA2    333   CIAO1_KLULA Probable cytosolic iron-sulfur pr...2650.81     35.8     21     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
341P14197    478   AAC3_DICDI WD repeat-containing protein AAC3 ...652.4     34.3     23     52
342P54686    597   WD42_DICDI WD repeat-containing protein 2 hom...490.83     36.2     37     45GO:0060187; C:cell pole; IDA:dictyBase.::GO:0030864; C:cortical actin cytoskeleton; IDA:dictyBase.::GO:0001891; C:phagocytic cup; IDA:dictyBase.
GO:0030042; P:actin filament depolymerization; IMP:dictyBase.::GO:0008283; P:cell proliferation; IMP:dictyBase.::GO:0006935; P:chemotaxis; IMP:dictyBase.::GO:0006909; P:phagocytosis; IMP:dictyBase.::GO:0006907; P:pinocytosis; IMP:dictyBase.
343Q9LJR3    845   SPA3_ARATH Protein SPA1-RELATED 3 OS=Arabidop...1330.83     36.2     26     41GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:InterPro.::GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0004672; F:protein kinase activity; IEA:InterPro.
GO:0009585; P:red, far-red light phototransduction; IEA:UniProtKB-KW.
344B7PY76    425   WDR12_IXOSC Ribosome biogenesis protein WDR12...1540.83     35.8     21     40GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
345Q2GVT8    1258   SEC31_CHAGB Protein transport protein SEC31 O...2100.83     36.2     20     35GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
346Q54S77    1966   VPS15_DICDI Probable serine/threonine-protein...420.84     36.2     45     57GO:0000139; C:Golgi membrane; ISS:dictyBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004674; F:protein serine/threonine kinase activity; ISS:dictyBase.
GO:0045053; P:protein retention in Golgi apparatus; ISS:dictyBase.::GO:0006623; P:protein targeting to vacuole; ISS:dictyBase.
347Q8VBV4    629   FBXW7_MOUSE F-box/WD repeat-containing protei...2480.84     36.2     19     40GO:0005783; C:endoplasmic reticulum; IDA:MGI.::GO:0005794; C:Golgi apparatus; IDA:MGI.::GO:0005634; C:nucleus; IDA:BHF-UCL.::GO:0048471; C:perinuclear region of cytoplasm; IDA:BHF-UCL.::GO:0019005; C:SCF ubiquitin ligase complex; ISS:UniProtKB.
GO:0005515; F:protein binding; IPI:MGI.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:MGI.
GO:0007219; P:Notch signaling pathway; IDA:MGI.::GO:0016567; P:protein ubiquitination; ISS:UniProtKB.::GO:0031146; P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
348Q9R1K5    493   FZR_MOUSE Fizzy-related protein homolog OS=Mu...1770.86     35.8     24     41
GO:0005515; F:protein binding; IPI:IntAct.
GO:0051488; P:activation of anaphase-promoting complex activity; ISS:UniProtKB.::GO:0031145; P:anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0031572; P:G2/M transition DNA damage checkpoint; ISS:UniProtKB.::GO:0070306; P:lens fiber cell differentiation; IMP:MGI.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0090344; P:negative regulation of cell aging; IMP:BHF-UCL.::GO:0008284; P:positive regulation of cell proliferation; IMP:BHF-UCL.::GO:0045732; P:positive regulation of protein catabolic process; ISS:UniProtKB.::GO:0040020; P:regulation of meiosis; IDA:MGI.
349P93107    606   PF20_CHLRE Flagellar WD repeat-containing pro...2130.87     35.8     23     42GO:0005929; C:cilium; IEA:UniProtKB-KW.::GO:0019861; C:flagellum; IEA:UniProtKB-SubCell.
350Q95JL5    571   WDR16_MACFA WD repeat-containing protein 16 O...2670.89     35.8     19     37GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
351Q4WLM7    467   LIS1_ASPFU Nuclear distribution protein nudF ...1370.9     35.8     23     35GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
352B0XM00    467   LIS1_ASPFC Nuclear distribution protein nudF ...1370.9     35.8     23     35GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
353Q5A7Q3    389   PRP46_CANAL Pre-mRNA-splicing factor PRP46 OS...1583.8     33.9     25     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
354Q9NVX2    485   NLE1_HUMAN Notchless protein homolog 1 OS=Hom...469.8     32.3     30     54GO:0005730; C:nucleolus; IDA:HPA.
355Q5XIG8    350   STRAP_RAT Serine-threonine kinase receptor-as...1880.96     35.4     21     39GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
356Q6FNU4    1281   SEC31_CANGA Protein transport protein SEC31 O...1680.97     35.8     22     42GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:InterPro.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
357O42248    317   GBLP_DANRE Guanine nucleotide-binding protein...3120.98     35.4     23     37GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0001525; P:angiogenesis; IMP:ZFIN.::GO:0030178; P:negative regulation of Wnt receptor signaling pathway; IMP:UniProtKB.::GO:2000543; P:positive regulation of gastrulation; IMP:UniProtKB.::GO:0051302; P:regulation of cell division; IMP:UniProtKB.::GO:2000114; P:regulation of establishment of cell polarity; IMP:UniProtKB.::GO:0032880; P:regulation of protein localization; IMP:UniProtKB.
358Q9VU68    608   WDR1_DROME Actin-interacting protein 1 OS=Dro...1171     35.8     27     43GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IDA:UniProtKB.
GO:0003779; F:actin binding; ISS:FlyBase.
GO:0030042; P:actin filament depolymerization; IMP:FlyBase.::GO:0001736; P:establishment of planar polarity; IMP:UniProtKB.::GO:0035317; P:imaginal disc-derived wing hair organization; IMP:FlyBase.::GO:0006911; P:phagocytosis, engulfment; IMP:FlyBase.::GO:0030834; P:regulation of actin filament depolymerization; IMP:UniProtKB.::GO:0045214; P:sarcomere organization; IMP:FlyBase.
359B0DWM8    452   YTM1_LACBS Ribosome biogenesis protein YTM1 O...1131     35.4     27     38GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
360Q8NA23    367   WDR31_HUMAN WD repeat-containing protein 31 O...2351.1     35.4     22     39
361Q6NVM2    655   KTNB1_XENTR Katanin p80 WD40-containing subun...1341.1     35.8     20     43GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
records
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