Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR030C
Length:
506
Number of sequences:
5887
Description:
YDR030C RAD28 SGDID:S000002437, Chr IV from 503273-501753, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein involved in DNA repair, related to the human CSA protein that is involved in transcription-coupled repair nucleotide excision repair"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
211P69104    318   GBLP_TRYBR Guanine nucleotide-binding protein...3310.095     38.5     20     37
212P69103    318   GBLP_TRYBB Guanine nucleotide-binding protein...3310.095     38.5     20     37
213O22607    507   MSI4_ARATH WD-40 repeat-containing protein MS...2050.095     38.9     22     40GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0005730; C:nucleolus; IDA:TAIR.
GO:0046872; F:metal ion binding; IDA:TAIR.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IMP:TAIR.::GO:0009908; P:flower development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0010224; P:response to UV-B; IEP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
214Q8C761    999   WDR60_MOUSE WD repeat-containing protein 60 O...380.11     38.9     34     68
215P91343    439   WDR12_CAEEL Ribosome biogenesis protein WDR12...1310.11     38.5     24     43GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0007276; P:gamete generation; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040019; P:positive regulation of embryonic development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.
216Q6KAU8    623   A16L2_MOUSE Autophagy-related protein 16-2 OS...1084.2     33.9     23     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
217Q5VQ78    907   COB21_ORYSJ Coatomer subunit beta'-1 OS=Oryza...2780.12     38.9     22     36GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
218Q96EX3    536   WDR34_HUMAN WD repeat-containing protein 34 O...540.12     38.5     37     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
219O16519    620   GAD1_CAEEL Gastrulation defective protein 1 O...2430.13     38.5     23     41
GO:0005515; F:protein binding; IPI:IntAct.
GO:0042074; P:cell migration involved in gastrulation; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0000132; P:establishment of mitotic spindle orientation; IMP:WormBase.::GO:0007346; P:regulation of mitotic cell cycle; IMP:WormBase.
220Q8H0T9    837   KTNB1_ARATH Katanin p80 WD40 repeat-containin...1330.13     38.5     24     44GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0005515; F:protein binding; IPI:TAIR.
221Q9D7H2    328   WDR5B_MOUSE WD repeat-containing protein 5B O...1980.14     38.1     23     40
222Q29KQ0    419   WDR12_DROPS Ribosome biogenesis protein WDR12...1300.14     38.5     27     45GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
223Q5E9I8    546   DCA11_BOVIN DDB1- and CUL4-associated factor ...2220.14     38.5     21     36
224B4GT01    419   WDR12_DROPE Ribosome biogenesis protein WDR12...1300.14     38.1     27     45GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
225B4I195    326   EIF3I_DROSE Eukaryotic translation initiation...1680.14     38.1     21     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
226O02195    326   EIF3I_DROME Eukaryotic translation initiation...1680.14     38.1     21     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005875; C:microtubule associated complex; IDA:FlyBase.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
227Q6FJZ9    427   PRP46_CANGA Pre-mRNA-splicing factor PRP46 OS...1290.15     38.1     26     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
228Q9FLX9    473   NLE1_ARATH Notchless protein homolog OS=Arabi...540.15     38.5     31     63GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
229B3N4C7    326   EIF3I_DROER Eukaryotic translation initiation...1680.15     38.1     21     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
230Q6FXI8    419   HAT2_CANGA Histone acetyltransferase type B s...1250.16     38.1     22     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
231Q00808    1356   HETE1_PODAS Vegetative incompatibility protei...2484.1     33.9     23     38
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
232B4LS78    419   WDR12_DROVI Ribosome biogenesis protein WDR12...1300.16     38.1     28     45GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
233Q54R82    942   MKKA_DICDI Mitogen-activated protein kinase k...1580.17     38.5     23     44GO:0005938; C:cell cortex; IDA:dictyBase.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004709; F:MAP kinase kinase kinase activity; ISS:dictyBase.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0030587; P:sorocarp development; IMP:dictyBase.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IEA:UniProtKB-KW.
234Q8K4P0    1330   WDR33_MOUSE pre-mRNA 3' end processing protei...1260.17     38.5     20     44GO:0005581; C:collagen; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IDA:MGI.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
235Q9C0J8    1336   WDR33_HUMAN pre-mRNA 3' end processing protei...1260.17     38.5     20     44GO:0005581; C:collagen; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006301; P:postreplication repair; NAS:UniProtKB.::GO:0007283; P:spermatogenesis; NAS:UniProtKB.
236P49026    326   GBLP_TOBAC Guanine nucleotide-binding protein...1770.18     37.7     25     43
237Q93794    587   SEL10_CAEEL F-box/WD repeat-containing protei...440.19     38.1     39     64GO:0030424; C:axon; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IDA:WormBase.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0046660; P:female sex differentiation; IMP:UniProtKB.::GO:0045746; P:negative regulation of Notch signaling pathway; IGI:UniProtKB.
238Q8JZX3    405   POC1A_MOUSE POC1 centriolar protein homolog A...1320.9     35.8     24     42GO:0005814; C:centriole; ISS:UniProtKB.::GO:0005932; C:microtubule basal body; ISS:UniProtKB.
239B3N534    420   WDR12_DROER Ribosome biogenesis protein WDR12...1540.19     37.7     25     45GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
240P0CS48    473   PRP46_CRYNJ Pre-mRNA-splicing factor PRP46 OS...1510.19     38.1     23     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
241B4N0L0    322   EIF3I_DROWI Eukaryotic translation initiation...1680.19     37.7     22     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
records
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