Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR027C
Length:
889
Number of sequences:
5887
Description:
YDR027C VPS54 SGDID:S000002434, Chr IV from 497318-494649, Genome Release 64-1-1, reverse complement, Verified ORF, "Component of the GARP (Golgi-associated retrograde protein) complex, Vps51p-Vps52p-Vps53p-Vps54p, which is required for the recycling of proteins from endosomes to the late Golgi; potentially phosphorylated by Cdc28p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q12071    889   VPS54_YEAST Vacuolar protein sorting-associat...8890     1831     100     100GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.::GO:0000938; C:GARP complex; IPI:SGD.::GO:0031966; C:mitochondrial membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0030476; P:ascospore wall assembly; IMP:SGD.::GO:0006896; P:Golgi to vacuole transport; IMP:SGD.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0042147; P:retrograde transport, endosome to Golgi; IDA:SGD.
2O14093    949   VPS54_SCHPO Vacuolar protein sorting-associat...5570.00000004     61.2     21     39GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.::GO:0000938; C:GARP complex; ISS:PomBase.
GO:0006896; P:Golgi to vacuole transport; ISS:PomBase.::GO:0006886; P:intracellular protein transport; IC:PomBase.::GO:0042147; P:retrograde transport, endosome to Golgi; ISS:PomBase.
3Q5SPW0    977   VPS54_MOUSE Vacuolar protein sorting-associat...2370.0001     50.1     25     42
GO:0040007; P:growth; IMP:MGI.::GO:0048873; P:homeostasis of number of cells within a tissue; IMP:MGI.::GO:0050881; P:musculoskeletal movement; IMP:MGI.::GO:0060052; P:neurofilament cytoskeleton organization; IMP:MGI.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0042147; P:retrograde transport, endosome to Golgi; IEA:InterPro.
4Q9VLC0    940   VPS54_DROME Vacuolar protein sorting-associat...2100.0001     49.7     21     42GO:0005794; C:Golgi apparatus; ISS:UniProtKB.::GO:0005739; C:mitochondrion; ISS:UniProtKB.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006896; P:Golgi to vacuole transport; ISS:UniProtKB.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0042147; P:retrograde transport, endosome to Golgi; ISS:UniProtKB.::GO:0007291; P:sperm individualization; IMP:FlyBase.
5Q9JMK8    965   VPS54_RAT Vacuolar protein sorting-associated...1360.0003     48.5     29     45
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0042147; P:retrograde transport, endosome to Golgi; IEA:InterPro.
6Q9P1Q0    977   VPS54_HUMAN Vacuolar protein sorting-associat...2320.0003     48.1     26     44
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0042147; P:retrograde transport, endosome to Golgi; IEA:InterPro.
7Q5ZMC2    1007   MYO1G_CHICK Unconventional myosin-Ig OS=Gallu...1671.6     36.2     23     43GO:0016459; C:myosin complex; IEA:UniProtKB-KW.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003774; F:motor activity; IEA:InterPro.
8Q5HP69    392   RS1_STAEQ 30S ribosomal protein S1 OS=Staphyl...1531.7     35.8     25     47GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
records
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