Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDR002W
Length:
201
Number of sequences:
5887
Description:
YDR002W YRB1 SGDID:S000002409, Chr IV from 453045-453650, Genome Release 64-1-1, Verified ORF, "Ran GTPase binding protein; involved in nuclear protein import and RNA export, ubiquitin-mediated protein degradation during the cell cycle; shuttles between the nucleus and cytoplasm; is essential; homolog of human RanBP1"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P41920    201   YRB1_YEAST Ran-specific GTPase-activating pro...2017e-143     403     100     100GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0005096; F:GTPase activator activity; IEA:UniProtKB-KW.::GO:0008536; F:Ran GTPase binding; IDA:SGD.
GO:0000082; P:G1/S transition of mitotic cell cycle; IMP:SGD.::GO:0006606; P:protein import into nucleus; IMP:SGD.::GO:0006405; P:RNA export from nucleus; IMP:SGD.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IMP:SGD.
2Q09717    215   RANG_SCHPO Ran-specific GTPase-activating pro...1792e-57     186     58     70GO:0005829; C:cytosol; IDA:PomBase.
GO:0005525; F:GTP binding; TAS:PomBase.::GO:0005096; F:GTPase activator activity; IEA:UniProtKB-KW.
GO:0006606; P:protein import into nucleus; ISS:PomBase.::GO:0031291; P:Ran protein signal transduction; IGI:PomBase.::GO:0006405; P:RNA export from nucleus; ISS:PomBase.
3Q3T0M7    206   RANG_BOVIN Ran-specific GTPase-activating pro...1502e-46     158     55     69
GO:0005096; F:GTPase activator activity; IEA:UniProtKB-KW.
GO:0046907; P:intracellular transport; IEA:InterPro.
4P34022    203   RANG_MOUSE Ran-specific GTPase-activating pro...1543e-46     157     54     69GO:0005813; C:centrosome; IDA:MGI.
GO:0005096; F:GTPase activator activity; IEA:UniProtKB-KW.
GO:0046907; P:intracellular transport; IEA:InterPro.::GO:0046604; P:positive regulation of mitotic centrosome separation; IDA:MGI.::GO:0007051; P:spindle organization; IDA:MGI.
5P43487    201   RANG_HUMAN Ran-specific GTPase-activating pro...1543e-46     157     54     69GO:0005635; C:nuclear envelope; TAS:Reactome.
GO:0005092; F:GDP-dissociation inhibitor activity; TAS:ProtInc.::GO:0005096; F:GTPase activator activity; IEA:UniProtKB-KW.::GO:0008536; F:Ran GTPase binding; TAS:ProtInc.
GO:0046907; P:intracellular transport; IEA:InterPro.::GO:0007165; P:signal transduction; TAS:UniProtKB.::GO:0016032; P:viral reproduction; TAS:Reactome.
6Q9ERU9    3053   RBP2_MOUSE E3 SUMO-protein ligase RanBP2 OS=M...1615e-33     131     43     66GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0046907; P:intracellular transport; IEA:InterPro.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006457; P:protein folding; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
7P49792    3224   RBP2_HUMAN E3 SUMO-protein ligase RanBP2 OS=H...1611e-32     130     43     66GO:0005829; C:cytosol; TAS:Reactome.::GO:0005643; C:nuclear pore; IDA:UniProtKB.
GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IEA:UniProtKB-KW.::GO:0008536; F:Ran GTPase binding; TAS:ProtInc.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0005975; P:carbohydrate metabolic process; TAS:Reactome.::GO:0019221; P:cytokine-mediated signaling pathway; TAS:Reactome.::GO:0015758; P:glucose transport; TAS:Reactome.::GO:0000236; P:mitotic prometaphase; TAS:Reactome.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006457; P:protein folding; IEA:UniProtKB-KW.::GO:0006606; P:protein import into nucleus; TAS:ProtInc.::GO:0016925; P:protein sumoylation; IDA:UniProtKB.::GO:0010827; P:regulation of glucose transport; TAS:Reactome.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0055085; P:transmembrane transport; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
8Q54KD9    194   RANG_DICDI Ran-specific GTPase-activating pro...1443e-40     141     48     69GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
GO:0008536; F:Ran GTPase binding; ISS:dictyBase.
GO:0046907; P:intracellular transport; IEA:InterPro.::GO:0031291; P:Ran protein signal transduction; ISS:dictyBase.
9O14715    1765   RGPD8_HUMAN RANBP2-like and GRIP domain-conta...1391e-31     126     45     70GO:0005643; C:nuclear pore; NAS:UniProtKB.
GO:0008536; F:Ran GTPase binding; NAS:UniProtKB.
GO:0000042; P:protein targeting to Golgi; IEA:InterPro.
10Q99666    1765   RGPD5_HUMAN RANBP2-like and GRIP domain-conta...1392e-31     126     45     70GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0000042; P:protein targeting to Golgi; IEA:InterPro.
11P0DJD0    1748   RGPD1_HUMAN RANBP2-like and GRIP domain-conta...1612e-32     129     42     66
GO:0005488; F:binding; IEA:InterPro.
GO:0000042; P:protein targeting to Golgi; IEA:InterPro.
12P0DJD1    1756   RGPD2_HUMAN RANBP2-like and GRIP domain-conta...1612e-31     126     42     65
GO:0005488; F:binding; IEA:InterPro.
GO:0000042; P:protein targeting to Golgi; IEA:InterPro.
13A6NKT7    1758   RGPD3_HUMAN RanBP2-like and GRIP domain-conta...1615e-32     128     42     65
GO:0005488; F:binding; IEA:InterPro.
GO:0000042; P:protein targeting to Golgi; IEA:InterPro.
14Q7Z3J3    1758   RGPD4_HUMAN RanBP2-like and GRIP domain-conta...1612e-32     129     42     66
GO:0005488; F:binding; IEA:InterPro.
GO:0000042; P:protein targeting to Golgi; IEA:InterPro.
15P48820    1085   RBP2_BOVIN E3 SUMO-protein ligase RanBP2 OS=B...1343e-34     134     50     72GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IEA:UniProtKB-KW.
GO:0046907; P:intracellular transport; IEA:InterPro.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006457; P:protein folding; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
16Q9LMK7    228   RBP1A_ARATH Ran-binding protein 1 homolog a O...1382e-34     127     45     65GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0046907; P:intracellular transport; IEA:InterPro.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
17Q8RWG8    217   RBP1B_ARATH Ran-binding protein 1 homolog b O...1515e-34     126     41     63GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0046907; P:intracellular transport; IEA:InterPro.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
18P92985    219   RBP1C_ARATH Ran-binding protein 1 homolog c O...1384e-33     123     43     70GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:TAIR.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0000060; P:protein import into nucleus, translocation; TAS:TAIR.
19Q8SSI6    219   YRB1_ENCCU Ran-specific GTPase-activating pro...1560.00000000000002     72     30     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005096; F:GTPase activator activity; IEA:UniProtKB-KW.
GO:0046907; P:intracellular transport; IEA:InterPro.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
20P32499    720   NUP2_YEAST Nucleoporin NUP2 OS=Saccharomyces ...1820.0000000001     63.5     29     47GO:0005739; C:mitochondrion; IDA:SGD.::GO:0000790; C:nuclear chromatin; IDA:SGD.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; TAS:SGD.
GO:0006348; P:chromatin silencing at telomere; IMP:SGD.::GO:0031990; P:mRNA export from nucleus in response to heat stress; IMP:SGD.::GO:0006609; P:mRNA-binding (hnRNP) protein import into nucleus; TAS:SGD.::GO:0006607; P:NLS-bearing substrate import into nucleus; TAS:SGD.::GO:0006999; P:nuclear pore organization; TAS:SGD.::GO:0070481; P:nuclear-transcribed mRNA catabolic process, non-stop decay; IMP:SGD.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:SGD.::GO:0000973; P:posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery; IMP:SGD.::GO:0006611; P:protein export from nucleus; TAS:SGD.::GO:0006612; P:protein targeting to membrane; IMP:SGD.::GO:0006610; P:ribosomal protein import into nucleus; TAS:SGD.::GO:0006407; P:rRNA export from nucleus; TAS:SGD.::GO:0006408; P:snRNA export from nucleus; TAS:SGD.::GO:0006608; P:snRNP protein import into nucleus; TAS:SGD.::GO:0006409; P:tRNA export from nucleus; TAS:SGD.
21P40517    327   YRB2_YEAST Ran-specific GTPase-activating pro...1210.0000000003     62     33     53GO:0005643; C:nuclear pore; IDA:SGD.
GO:0005096; F:GTPase activator activity; IEA:UniProtKB-KW.
GO:0006611; P:protein export from nucleus; IMP:SGD.::GO:0031938; P:regulation of chromatin silencing at telomere; IMP:SGD.::GO:0000056; P:ribosomal small subunit export from nucleus; IMP:SGD.
22Q9CT10    491   RANB3_MOUSE Ran-binding protein 3 OS=Mus musc...710.000004     49.7     35     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046907; P:intracellular transport; IEA:InterPro.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
23Q9USL4    565   NUP61_SCHPO Nucleoporin nup61 OS=Schizosaccha...1360.000005     49.7     32     51GO:0031965; C:nuclear membrane; IDA:PomBase.::GO:0005643; C:nuclear pore; TAS:PomBase.
GO:0007094; P:mitotic cell cycle spindle assembly checkpoint; IMP:PomBase.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006913; P:nucleocytoplasmic transport; TAS:PomBase.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
24Q86VV4    465   RNB3L_HUMAN Ran-binding protein 3-like OS=Hom...710.000005     49.7     35     54
GO:0046907; P:intracellular transport; IEA:InterPro.
25Q9H6Z4    567   RANB3_HUMAN Ran-binding protein 3 OS=Homo sap...710.000009     48.9     35     56GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005634; C:nucleus; IDA:HPA.
GO:0070412; F:R-SMAD binding; IPI:UniProtKB.::GO:0008536; F:Ran GTPase binding; TAS:ProtInc.
GO:0046907; P:intracellular transport; IEA:InterPro.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
26Q4R4T9    499   RANB3_MACFA Ran-binding protein 3 OS=Macaca f...710.00001     48.5     35     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046907; P:intracellular transport; IEA:InterPro.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
27Q5R4Y2    494   RANB3_PONAB Ran-binding protein 3 OS=Pongo ab...710.00001     48.5     35     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046907; P:intracellular transport; IEA:InterPro.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
28Q6PDH4    491   RNB3L_MOUSE Ran-binding protein 3-like OS=Mus...710.00003     47.4     34     54
GO:0046907; P:intracellular transport; IEA:InterPro.
29Q09146    399   HBA1_SCHPO Brefeldin A resistance protein OS=...920.002     42     34     52GO:0005654; C:nucleoplasm; IDA:PomBase.
GO:0071238; P:cellular response to brefeldin A; IMP:PomBase.::GO:0071313; P:cellular response to caffeine; IMP:PomBase.::GO:0034599; P:cellular response to oxidative stress; IGI:PomBase.::GO:0006611; P:protein export from nucleus; IMP:PomBase.::GO:0000056; P:ribosomal small subunit export from nucleus; ISS:PomBase.
30Q5M8L3    363   GKAP1_XENTR G kinase-anchoring protein 1 OS=X...1230.87     33.9     28     50GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.
31Q9UKX7    468   NUP50_HUMAN Nuclear pore complex protein Nup5...1201.6     33.1     31     44GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; TAS:ProtInc.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0005975; P:carbohydrate metabolic process; TAS:Reactome.::GO:0019221; P:cytokine-mediated signaling pathway; TAS:Reactome.::GO:0015758; P:glucose transport; TAS:Reactome.::GO:0046907; P:intracellular transport; IEA:InterPro.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0010827; P:regulation of glucose transport; TAS:Reactome.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0055085; P:transmembrane transport; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
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