UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YDL208W

Length:

156

Number of sequences:

5887

Description:

YDL208W NHP2 SGDID:S000002367, Chr IV from 87512-87982, Genome Release 64-1-1, Verified ORF, "Nuclear protein related to mammalian high mobility group (HMG) proteins, essential for function of H/ACA-type snoRNPs, which are involved in 18S rRNA processing"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
1	P32495	156	NHP2_YEAST H/ACA ribonucleoprotein complex su...	156	1e-106	308	100	100	GO:0031429; C:box H/ACA snoRNP complex; IPI:SGD.
									GO:0005515; F:protein binding; IPI:IntAct.::GO:0030515; F:snoRNA binding; IDA:UniProtKB.
									GO:0000469; P:cleavage involved in rRNA processing; IMP:SGD.::GO:0031118; P:rRNA pseudouridine synthesis; IMP:SGD.::GO:0031120; P:snRNA pseudouridine synthesis; IDA:SGD.
2	Q9P7H0	154	NHP2_SCHPO H/ACA ribonucleoprotein complex su...	156	4e-63	197	67	81	GO:0031429; C:box H/ACA snoRNP complex; IGI:PomBase.
									GO:0034513; F:box H/ACA snoRNA binding; IGI:PomBase.::GO:0019843; F:rRNA binding; IC:PomBase.
									GO:0031118; P:rRNA pseudouridine synthesis; ISS:UniProtKB.::GO:0031120; P:snRNA pseudouridine synthesis; IGI:PomBase.
3	Q6P8C4	149	NHP2_XENTR H/ACA ribonucleoprotein complex su...	156	2e-43	146	48	65	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:UniProtKB.
									GO:0030515; F:snoRNA binding; ISS:UniProtKB.
									GO:0031118; P:rRNA pseudouridine synthesis; ISS:UniProtKB.
4	Q6NTV9	149	NHP2_XENLA H/ACA ribonucleoprotein complex su...	156	8e-43	145	48	65	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:UniProtKB.
									GO:0030515; F:snoRNA binding; ISS:UniProtKB.
									GO:0031118; P:rRNA pseudouridine synthesis; ISS:UniProtKB.
5	Q5E950	153	NHP2_BOVIN H/ACA ribonucleoprotein complex su...	128	9e-42	142	51	73	GO:0015030; C:Cajal body; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
									GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
6	Q9CRB2	153	NHP2_MOUSE H/ACA ribonucleoprotein complex su...	128	2e-41	141	51	73	GO:0015030; C:Cajal body; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:UniProtKB.
									GO:0030515; F:snoRNA binding; ISS:UniProtKB.
									GO:0031118; P:rRNA pseudouridine synthesis; ISS:UniProtKB.
7	Q9NX24	153	NHP2_HUMAN H/ACA ribonucleoprotein complex su...	128	3e-41	141	50	73	GO:0015030; C:Cajal body; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:UniProtKB.
									GO:0030515; F:snoRNA binding; ISS:UniProtKB.
									GO:0031118; P:rRNA pseudouridine synthesis; ISS:UniProtKB.
8	Q5RC65	153	NHP2_PONAB H/ACA ribonucleoprotein complex su...	128	9e-41	140	49	73	GO:0015030; C:Cajal body; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:UniProtKB.
									GO:0030515; F:snoRNA binding; ISS:UniProtKB.
									GO:0031118; P:rRNA pseudouridine synthesis; ISS:UniProtKB.
9	Q9LEY9	156	NHP2_ARATH H/ACA ribonucleoprotein complex su...	126	1e-39	137	52	71	GO:0005730; C:nucleolus; IDA:TAIR.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:UniProtKB.
									GO:0030515; F:snoRNA binding; ISS:UniProtKB.
									GO:0031118; P:rRNA pseudouridine synthesis; ISS:UniProtKB.
10	Q8I7X7	159	NHP2_BRABE H/ACA ribonucleoprotein complex su...	152	5e-39	135	43	64	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:UniProtKB.
									GO:0030515; F:snoRNA binding; ISS:UniProtKB.
									GO:0031118; P:rRNA pseudouridine synthesis; ISS:UniProtKB.
11	Q6PBV6	150	NHP2_DANRE H/ACA ribonucleoprotein complex su...	147	8e-36	127	47	67	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:UniProtKB.
									GO:0030515; F:snoRNA binding; ISS:UniProtKB.
									GO:0031118; P:rRNA pseudouridine synthesis; ISS:UniProtKB.
12	Q60YI3	163	NHP2_CAEBR Putative H/ACA ribonucleoprotein c...	140	5e-33	120	41	66	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:UniProtKB.
									GO:0030515; F:snoRNA binding; ISS:UniProtKB.
									GO:0031118; P:rRNA pseudouridine synthesis; ISS:UniProtKB.
13	Q9XXD4	163	NHP2_CAEEL Putative H/ACA ribonucleoprotein c...	140	8e-33	119	41	66	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:UniProtKB.
									GO:0030515; F:snoRNA binding; ISS:UniProtKB.
									GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0031118; P:rRNA pseudouridine synthesis; ISS:UniProtKB.
14	Q9V3U2	160	NHP2_DROME H/ACA ribonucleoprotein complex su...	140	2e-30	113	41	61	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:UniProtKB.
									GO:0030515; F:snoRNA binding; ISS:UniProtKB.
									GO:0031118; P:rRNA pseudouridine synthesis; ISS:UniProtKB.
15	Q6XIP0	160	NHP2_DROYA H/ACA ribonucleoprotein complex su...	140	1e-29	111	41	61	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:UniProtKB.
									GO:0030515; F:snoRNA binding; ISS:UniProtKB.
									GO:0031118; P:rRNA pseudouridine synthesis; ISS:UniProtKB.
16	Q4P0K3	126	SNU13_USTMA 13 kDa ribonucleoprotein-associat...	96	2e-21	89	42	61	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
									GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
17	Q6P8E9	128	NH2L1_XENTR NHP2-like protein 1 OS=Xenopus tr...	110	2e-21	89	42	58	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
									GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
18	Q6CM69	126	SNU13_KLULA 13 kDa ribonucleoprotein-associat...	96	3e-21	88.6	40	63	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
									GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
19	Q6FQV5	126	SNU13_CANGA 13 kDa ribonucleoprotein-associat...	96	4e-21	88.6	40	65	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
									GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
20	O74690	125	SNU13_SCHPO 13 kDa ribonucleoprotein-associat...	91	6e-21	87.8	42	63	GO:0005730; C:nucleolus; IDA:PomBase.::GO:0032040; C:small-subunit processome; ISS:PomBase.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; ISS:PomBase.
									GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0030490; P:maturation of SSU-rRNA; ISS:PomBase.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase.
21	Q5XH16	128	NH2L1_XENLA NHP2-like protein 1 OS=Xenopus la...	95	7e-21	87.8	42	62	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
									GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
22	Q9U3Z7	127	NH2L1_DROME NHP2-like protein 1 homolog OS=Dr...	128	8e-21	87.4	34	55	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase.::GO:0030532; C:small nuclear ribonucleoprotein complex; ISS:FlyBase.
									GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:FlyBase.::GO:0007422; P:peripheral nervous system development; TAS:FlyBase.::GO:0042254; P:ribosome biogenesis; IEA:InterPro.
23	Q757T2	127	SNU13_ASHGO 13 kDa ribonucleoprotein-associat...	91	9e-21	87.4	40	63	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
									GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
24	P0CQ52	127	SNU13_CRYNJ 13 kDa ribonucleoprotein-associat...	91	1e-20	87	40	63	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
									GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
25	P0CQ53	127	SNU13_CRYNB 13 kDa ribonucleoprotein-associat...	91	1e-20	87	40	63	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
									GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
26	Q6C0I0	126	SNU13_YARLI 13 kDa ribonucleoprotein-associat...	91	1e-20	86.7	41	63	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
									GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
27	P55770	128	NH2L1_RAT NHP2-like protein 1 OS=Rattus norve...	91	2e-20	86.7	43	62	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
									GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
28	Q9D0T1	128	NH2L1_MOUSE NHP2-like protein 1 OS=Mus muscul...	91	2e-20	86.7	43	62	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
29	Q4R5C6	128	NH2L1_MACFA NHP2-like protein 1 OS=Macaca fas...	91	2e-20	86.7	43	62	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
									GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
30	P55769	128	NH2L1_HUMAN NHP2-like protein 1 OS=Homo sapie...	91	2e-20	86.7	43	62	GO:0031428; C:box C/D snoRNP complex; NAS:BHF-UCL.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
									GO:0005515; F:protein binding; IPI:BHF-UCL.::GO:0003723; F:RNA binding; TAS:ProtInc.
									GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0042254; P:ribosome biogenesis; IEA:InterPro.
31	Q3B8S0	128	NH2L1_BOVIN NHP2-like protein 1 OS=Bos taurus...	91	2e-20	86.7	43	62	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.

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