Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL208W
Length:
156
Number of sequences:
5887
Description:
YDL208W NHP2 SGDID:S000002367, Chr IV from 87512-87982, Genome Release 64-1-1, Verified ORF, "Nuclear protein related to mammalian high mobility group (HMG) proteins, essential for function of H/ACA-type snoRNPs, which are involved in 18S rRNA processing"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
91Q9LZH9    256   RL7A2_ARATH 60S ribosomal protein L7a-2 OS=Ar...990.000002     49.3     28     46GO:0022625; C:cytosolic large ribosomal subunit; IDA:TAIR.::GO:0005774; C:vacuolar membrane; IDA:TAIR.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.
92Q90YW2    266   RL7A_ICTPU 60S ribosomal protein L7a OS=Ictal...990.000002     49.3     29     45GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.
93Q2TBQ5    266   RL7A_BOVIN 60S ribosomal protein L7a OS=Bos t...990.000002     49.3     29     45
GO:0042254; P:ribosome biogenesis; IEA:InterPro.
94P35685    258   RL7A_ORYSJ 60S ribosomal protein L7a OS=Oryza...1000.000004     48.5     32     51
GO:0042254; P:ribosome biogenesis; IEA:InterPro.
95P62425    266   RL7A_RAT 60S ribosomal protein L7a OS=Rattus ...990.000004     48.5     29     45GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.
96Q4R5C2    266   RL7A_MACFA 60S ribosomal protein L7a OS=Macac...990.000004     48.5     29     45GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.
97P62424    266   RL7A_HUMAN 60S ribosomal protein L7a OS=Homo ...990.000004     48.5     29     45GO:0022625; C:cytosolic large ribosomal subunit; IDA:UniProtKB.::GO:0005624; C:membrane fraction; IDA:HGNC.::GO:0042788; C:polysomal ribosome; IDA:HGNC.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; TAS:ProtInc.::GO:0003735; F:structural constituent of ribosome; NAS:UniProtKB.
GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; TAS:Reactome.::GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; TAS:Reactome.::GO:0006414; P:translational elongation; TAS:Reactome.::GO:0006413; P:translational initiation; TAS:Reactome.::GO:0006415; P:translational termination; TAS:Reactome.::GO:0019083; P:viral transcription; TAS:Reactome.
98P12970    266   RL7A_MOUSE 60S ribosomal protein L7a OS=Mus m...990.000004     48.5     29     45GO:0005624; C:membrane fraction; IDA:HGNC.::GO:0042788; C:polysomal ribosome; IDA:HGNC.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.
99P32429    266   RL7A_CHICK 60S ribosomal protein L7a OS=Gallu...990.000005     48.1     30     44GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.
100O57592    266   RL7A_TAKRU 60S ribosomal protein L7a OS=Takif...990.000007     47.8     28     45GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.
101Q29375    132   RL7A_PIG 60S ribosomal protein L7a OS=Sus scr...690.000008     45.8     35     49GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.
102O13672    259   RL8_SCHPO 60S ribosomal protein L8 OS=Schizos...570.00001     47     37     58GO:0022625; C:cytosolic large ribosomal subunit; ISS:PomBase.
GO:0003735; F:structural constituent of ribosome; ISS:PomBase.
GO:0002181; P:cytoplasmic translation; NAS:PomBase.::GO:0042254; P:ribosome biogenesis; IEA:InterPro.
103P0DJ14    255   RL7A_TETTH 60S ribosomal protein L7a OS=Tetra...920.00001     47     27     48GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.
104Q9S9P1    144   RS121_ARATH 40S ribosomal protein S12-1 OS=Ar...730.00002     45.4     37     52GO:0022627; C:cytosolic small ribosomal subunit; IDA:TAIR.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0046686; P:response to cadmium ion; IEP:TAIR.::GO:0009651; P:response to salt stress; IEP:TAIR.::GO:0006412; P:translation; IEA:InterPro.
105Q9SKZ3    144   RS122_ARATH 40S ribosomal protein S12-2 OS=Ar...730.00002     45.4     36     52GO:0022627; C:cytosolic small ribosomal subunit; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
106P29453    256   RL8B_YEAST 60S ribosomal protein L8-B OS=Sacc...560.00003     45.8     38     55GO:0022625; C:cytosolic large ribosomal subunit; TAS:SGD.
GO:0003735; F:structural constituent of ribosome; TAS:SGD.
GO:0002181; P:cytoplasmic translation; TAS:SGD.::GO:0042254; P:ribosome biogenesis; IEA:InterPro.
107P17076    256   RL8A_YEAST 60S ribosomal protein L8-A OS=Sacc...560.00006     45.1     36     55GO:0022625; C:cytosolic large ribosomal subunit; TAS:SGD.
GO:0003735; F:structural constituent of ribosome; TAS:SGD.
GO:0002181; P:cytoplasmic translation; TAS:SGD.::GO:0042254; P:ribosome biogenesis; IEA:InterPro.
108Q9XHS0    143   RS12_HORVU 40S ribosomal protein S12 OS=Horde...1390.0001     42.7     26     43GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
109Q54PX9    136   RS12_DICDI 40S ribosomal protein S12 OS=Dicty...740.0002     42     32     53GO:0045335; C:phagocytic vesicle; IDA:dictyBase.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; ISS:dictyBase.::GO:0003735; F:structural constituent of ribosome; ISS:dictyBase.
GO:0009617; P:response to bacterium; IEP:dictyBase.::GO:0006412; P:translation; ISS:dictyBase.
110Q9SMI3    136   RS12_CYAPA 40S ribosomal protein S12 OS=Cyano...810.001     40     27     48GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
111P46350    82   RXL7_BACSU Ribosome-associated protein L7Ae-l...780.006     37.4     33     53GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
112Q8SSG1    193   RL7A_ENCCU 60S ribosomal protein L7a OS=Encep...770.02     37.7     29     44GO:0005840; C:ribosome; IEA:UniProtKB-KW.
113P48589    143   RS12_YEAST 40S ribosomal protein S12 OS=Sacch...580.02     37     34     57GO:0022627; C:cytosolic small ribosomal subunit; IDA:SGD.
GO:0003735; F:structural constituent of ribosome; IDA:SGD.
GO:0002181; P:cytoplasmic translation; IC:SGD.
114P49196    140   RS12_CAEEL 40S ribosomal protein S12 OS=Caeno...650.022     37     28     49GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040017; P:positive regulation of locomotion; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.::GO:0006412; P:translation; IEA:InterPro.
115P80455    139   RS12_DROME 40S ribosomal protein S12 OS=Droso...860.027     36.6     26     49GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
116P46405    132   RS12_PIG 40S ribosomal protein S12 OS=Sus scr...1140.097     35     26     44
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
117P25398    132   RS12_HUMAN 40S ribosomal protein S12 OS=Homo ...1140.097     35     26     44GO:0022627; C:cytosolic small ribosomal subunit; IDA:UniProtKB.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; TAS:Reactome.::GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; TAS:Reactome.::GO:0006414; P:translational elongation; TAS:Reactome.::GO:0006413; P:translational initiation; TAS:Reactome.::GO:0006415; P:translational termination; TAS:Reactome.::GO:0019083; P:viral transcription; TAS:Reactome.
118P84175    132   RS12_CHICK 40S ribosomal protein S12 OS=Gallu...1140.097     35     26     44
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
119Q76I81    132   RS12_BOVIN 40S ribosomal protein S12 OS=Bos t...1140.097     35     26     44GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
120Q9Z9M0    82   RXL7_BACHD Putative ribosomal protein L7Ae-li...660.13     33.5     33     56GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
121Q80UU2    280   RPP38_MOUSE Ribonuclease P protein subunit p3...470.14     35.4     36     55GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0004526; F:ribonuclease P activity; IEA:EC.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
records
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