Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL208W
Length:
156
Number of sequences:
5887
Description:
YDL208W NHP2 SGDID:S000002367, Chr IV from 87512-87982, Genome Release 64-1-1, Verified ORF, "Nuclear protein related to mammalian high mobility group (HMG) proteins, essential for function of H/ACA-type snoRNPs, which are involved in 18S rRNA processing"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q3B8S0    128   NH2L1_BOVIN NHP2-like protein 1 OS=Bos taurus...912e-20     86.7     43     62GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
32Q971C9    126   RL7A_SULTO 50S ribosomal protein L7Ae OS=Sulf...1332e-20     86.3     36     57GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006412; P:translation; IEA:InterPro.
33Q6BLQ3    126   SNU13_DEBHA 13 kDa ribonucleoprotein-associat...963e-20     85.9     39     60GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
34P39990    126   SNU13_YEAST 13 kDa ribonucleoprotein-associat...913e-20     85.9     38     63GO:0031428; C:box C/D snoRNP complex; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IDA:SGD.
GO:0003723; F:RNA binding; IDA:SGD.
GO:0000462; P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:SGD.
35Q5ANL6    126   SNU13_CANAL 13 kDa ribonucleoprotein-associat...964e-20     85.5     39     60GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
36B6YWH9    123   RL7A_THEON 50S ribosomal protein L7Ae OS=Ther...961e-19     84     39     66GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006412; P:translation; IEA:InterPro.
37Q4J8P1    126   RL7A_SULAC 50S ribosomal protein L7Ae OS=NBRC...1302e-19     84     36     58GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006412; P:translation; IEA:InterPro.
38Q5JGR3    123   RL7A_PYRKO 50S ribosomal protein L7Ae OS=(The...1093e-19     83.2     36     63GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006412; P:translation; IEA:InterPro.
39Q54ST0    129   NH2L1_DICDI NHP2-like protein 1 homolog OS=Di...1193e-19     83.2     34     56GO:0005730; C:nucleolus; ISS:dictyBase.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; ISS:dictyBase.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051726; P:regulation of cell cycle; ISS:dictyBase.::GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
40Q6KZI7    127   RL7A_PICTO 50S ribosomal protein L7Ae OS=1008...1076e-19     82.4     39     58GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006412; P:translation; IEA:InterPro.
41P62427    125   RL7A_NANEQ 50S ribosomal protein L7Ae OS=Nano...871e-17     79     39     69GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006412; P:translation; IEA:InterPro.
42C3N8Q2    127   RL7A_SULIY 50S ribosomal protein L7Ae OS=Sulf...1162e-17     78.6     35     59GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006412; P:translation; IEA:InterPro.
43C3NMR6    127   RL7A_SULIN 50S ribosomal protein L7Ae OS=Sulf...1162e-17     78.6     35     59GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006412; P:translation; IEA:InterPro.
44C3MYY9    127   RL7A_SULIM 50S ribosomal protein L7Ae OS=Sulf...1162e-17     78.6     35     59GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006412; P:translation; IEA:InterPro.
45C3MJN1    127   RL7A_SULIL 50S ribosomal protein L7Ae OS=Sulf...1162e-17     78.6     35     59GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006412; P:translation; IEA:InterPro.
46C4KJ77    127   RL7A_SULIK 50S ribosomal protein L7Ae OS=Sulf...1162e-17     78.6     35     59GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006412; P:translation; IEA:InterPro.
47C3N038    127   RL7A_SULIA 50S ribosomal protein L7Ae OS=Sulf...1162e-17     78.6     35     59GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006412; P:translation; IEA:InterPro.
48P55858    127   RL7A_SULSO 50S ribosomal protein L7Ae OS=P2)....943e-17     77.8     37     64GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006412; P:translation; IEA:InterPro.
49Q9YAX7    127   RL7A_AERPE 50S ribosomal protein L7Ae OS=1001...914e-17     77.4     41     64GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006412; P:translation; IEA:InterPro.
50A6UT51    117   RL7A_META3 50S ribosomal protein L7Ae OS=Meth...924e-17     77.4     40     65GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
51P62009    123   RL7A_PYRHO 50S ribosomal protein L7Ae OS=NBRC...1088e-17     76.6     38     62GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006412; P:translation; IEA:InterPro.
52P62008    123   RL7A_PYRAB 50S ribosomal protein L7Ae OS=Pyro...1088e-17     76.6     38     62GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006412; P:translation; IEA:HAMAP.
53Q8U160    123   RL7A_PYRFU 50S ribosomal protein L7Ae OS=Pyro...1088e-17     76.6     38     62GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006412; P:translation; IEA:InterPro.
54A2BK92    127   RL7A_HYPBU 50S ribosomal protein L7Ae OS=Hype...1139e-17     76.6     35     59GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006412; P:translation; IEA:InterPro.
55A0RUB4    126   RL7A_CENSY 50S ribosomal protein L7Ae OS=Cena...779e-17     76.6     43     68GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
56P54066    117   RL7A_METJA 50S ribosomal protein L7Ae OS=JCM ...939e-17     76.3     43     65GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006412; P:translation; IEA:InterPro.
57A3DMR6    128   RL7A_STAMF 50S ribosomal protein L7Ae OS=Stap...1211e-16     76.3     36     58GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006412; P:translation; IEA:InterPro.
58C5A1V9    123   RL7A_THEGJ 50S ribosomal protein L7Ae OS=Ther...1091e-16     75.9     37     62GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006412; P:translation; IEA:InterPro.
59A4YIL9    125   RL7A_METS5 50S ribosomal protein L7Ae OS=Meta...1201e-16     75.9     32     57GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
60Q97BK8    121   RL7A_THEVO 50S ribosomal protein L7Ae OS=1543...941e-16     75.9     37     64GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006412; P:translation; IEA:InterPro.
61Q9HJ56    121   RL7A_THEAC 50S ribosomal protein L7Ae OS=NBRC...943e-16     75.1     37     63GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0042254; P:ribosome biogenesis; IEA:InterPro.::GO:0006412; P:translation; IEA:InterPro.
records
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