Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL208W
Length:
156
Number of sequences:
5887
Description:
YDL208W NHP2 SGDID:S000002367, Chr IV from 87512-87982, Genome Release 64-1-1, Verified ORF, "Nuclear protein related to mammalian high mobility group (HMG) proteins, essential for function of H/ACA-type snoRNPs, which are involved in 18S rRNA processing"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
121Q80UU2    280   RPP38_MOUSE Ribonuclease P protein subunit p3...470.14     35.4     36     55GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0004526; F:ribonuclease P activity; IEA:EC.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
122O59936    132   RS12_ERYGR 40S ribosomal protein S12 OS=subsp...650.59     32.7     28     46GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
123A6VGV1    106   RL30E_METM7 50S ribosomal protein L30e OS=Met...970.64     32.3     28     42GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
124A9A9U8    106   RL30E_METM6 50S ribosomal protein L30e OS=Met...970.68     32.3     28     42GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
125Q9LXQ7    417   FB209_ARATH Putative F-box protein At3g58950 ...740.86     33.1     32     51
126Q6LXI6    100   RL30E_METMP 50S ribosomal protein L30e OS=Met...971.1     31.6     27     42GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
127P14025    105   RL30E_METVS 50S ribosomal protein L30e OS=Met...1021.4     31.2     27     45GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
128A8F978    82   RXL7_BACP2 Putative ribosomal protein L7Ae-li...781.6     30.8     28     54GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
129O13019    132   RS12_ORENI 40S ribosomal protein S12 OS=Oreoc...1172.1     31.2     26     44GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
130P12110    1019   CO6A2_HUMAN Collagen alpha-2(VI) chain OS=Hom...402.4     32     35     58GO:0005581; C:collagen; IEA:UniProtKB-KW.::GO:0005615; C:extracellular space; IDA:BHF-UCL.::GO:0043234; C:protein complex; IPI:MGI.
GO:0005201; F:extracellular matrix structural constituent; NAS:UniProtKB.::GO:0030674; F:protein binding, bridging; NAS:UniProtKB.
GO:0007411; P:axon guidance; TAS:Reactome.::GO:0016337; P:cell-cell adhesion; NAS:UniProtKB.::GO:0030198; P:extracellular matrix organization; NAS:UniProtKB.::GO:0070208; P:protein heterotrimerization; IPI:MGI.
131P54061    110   RL30E_METJA 50S ribosomal protein L30e OS=JCM...912.5     30.8     26     48GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
132A4FWF4    106   RL30E_METM5 50S ribosomal protein L30e OS=Met...973.6     30     27     42GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
133P63324    132   RS12_RAT 40S ribosomal protein S12 OS=Rattus ...1144     30.4     25     43GO:0022627; C:cytosolic small ribosomal subunit; IDA:RGD.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
134P63323    132   RS12_MOUSE 40S ribosomal protein S12 OS=Mus m...1144     30.4     25     43GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
135P47840    132   RS12_XENLA 40S ribosomal protein S12 OS=Xenop...1144.6     30.4     25     43GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
136Q02788    1034   CO6A2_MOUSE Collagen alpha-2(VI) chain OS=Mus...405.2     30.8     35     58GO:0005581; C:collagen; IEA:UniProtKB-KW.::GO:0042383; C:sarcolemma; IDA:MGI.
GO:0007155; P:cell adhesion; IEA:UniProtKB-KW.
137P15988    1022   CO6A2_CHICK Collagen alpha-2(VI) chain OS=Gal...405.8     30.8     33     58GO:0005581; C:collagen; IEA:UniProtKB-KW.
GO:0007155; P:cell adhesion; IEA:UniProtKB-KW.
138Q5PYH7    881   DLG2_DANRE Disks large homolog 2 OS=Danio rer...416.2     30.8     37     61
GO:0010923; P:negative regulation of phosphatase activity; ISS:UniProtKB.::GO:0050808; P:synapse organization; NAS:UniProtKB.::GO:0007268; P:synaptic transmission; NAS:UniProtKB.
139Q97EH1    79   RXL7_CLOAB Putative ribosomal protein L7Ae-li...586.5     28.9     26     60GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
140P71359    619   RECQ_HAEIN ATP-dependent DNA helicase recQ OS...658     30.4     32     51GO:0005622; C:intracellular; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0043140; F:ATP-dependent 3'-5' DNA helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0006260; P:DNA replication; IEA:InterPro.::GO:0009432; P:SOS response; IEA:InterPro.
141Q6C4U7    109   RL30_YARLI 60S ribosomal protein L30 OS=lipol...498.1     29.3     41     57GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
records
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