Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL190C
Length:
961
Number of sequences:
5887
Description:
YDL190C UFD2 SGDID:S000002349, Chr IV from 121592-118707, Genome Release 64-1-1, reverse complement, Verified ORF, "Ubiquitin chain assembly factor (E4) that cooperates with a ubiquitin-activating enzyme (E1), a ubiquitin-conjugating enzyme (E2), and a ubiquitin protein ligase (E3) to conjugate ubiquitin to substrates; also functions as an E3"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P54860    961   UFD2_YEAST E4 ubiquitin-protein ligase UFD2 O...9610     1971     100     100GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0034450; F:ubiquitin-ubiquitin ligase activity; IDA:SGD.
GO:0030433; P:ER-associated protein catabolic process; IMP:SGD.::GO:0006950; P:response to stress; IMP:SGD.
2Q9HE05    1010   UFD2_SCHPO Ubiquitin conjugation factor E4 OS...9573e-155     491     35     54GO:0005737; C:cytoplasm; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0034450; F:ubiquitin-ubiquitin ligase activity; IEA:InterPro.
GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro.
3Q9ES00    1173   UBE4B_MOUSE Ubiquitin conjugation factor E4 B...7591e-87     310     30     50GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:MGI.::GO:0000151; C:ubiquitin ligase complex; TAS:UniProtKB.
GO:0019899; F:enzyme binding; IPI:UniProtKB.::GO:0034450; F:ubiquitin-ubiquitin ligase activity; IDA:MGI.::GO:0051082; F:unfolded protein binding; NAS:UniProtKB.
GO:0006915; P:apoptotic process; ISS:UniProtKB.::GO:0031175; P:neuron projection development; IMP:MGI.::GO:0006457; P:protein folding; NAS:UniProtKB.::GO:0000209; P:protein polyubiquitination; IDA:MGI.::GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; TAS:UniProtKB.::GO:0034976; P:response to endoplasmic reticulum stress; IMP:MGI.::GO:0009411; P:response to UV; ISS:UniProtKB.::GO:0003222; P:ventricular trabecula myocardium morphogenesis; IMP:MGI.
4O95155    1302   UBE4B_HUMAN Ubiquitin conjugation factor E4 B...7219e-86     305     31     50GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0000151; C:ubiquitin ligase complex; TAS:UniProtKB.
GO:0019899; F:enzyme binding; ISS:UniProtKB.
GO:0006915; P:apoptotic process; IDA:UniProtKB.::GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; TAS:UniProtKB.::GO:0009411; P:response to UV; IDA:UniProtKB.
5Q9LF41    1038   UBE4_ARATH Probable ubiquitin conjugation fac...7325e-80     286     31     49GO:0005829; C:cytosol; IDA:TAIR.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0034450; F:ubiquitin-ubiquitin ligase activity; IEA:InterPro.
GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro.
6Q09349    980   UBE4_CAEEL Probable ubiquitin conjugation fac...8084e-65     241     27     47GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0034450; F:ubiquitin-ubiquitin ligase activity; IEA:InterPro.
GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro.
7A5PKG6    1067   UBE4A_BOVIN Ubiquitin conjugation factor E4 A...4921e-63     237     32     53GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro.
8Q14139    1066   UBE4A_HUMAN Ubiquitin conjugation factor E4 A...4916e-63     234     33     53GO:0000151; C:ubiquitin ligase complex; TAS:ProtInc.
GO:0006511; P:ubiquitin-dependent protein catabolic process; TAS:ProtInc.
9Q5R9G3    1066   UBE4A_PONAB Ubiquitin conjugation factor E4 A...4918e-63     234     33     53GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0034450; F:ubiquitin-ubiquitin ligase activity; IEA:InterPro.
GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro.
10Q6P7A2    1066   UBE4A_RAT Ubiquitin conjugation factor E4 A O...4914e-62     232     33     53GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro.
11A0AUS0    487   WSDU1_DANRE WD repeat, SAM and U-box domain-c...680.0001     49.7     40     56GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
12Q925F4    539   RNF37_MOUSE RING finger protein 37 OS=Mus mus...770.003     44.7     34     58GO:0005634; C:nucleus; IDA:MGI.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0034450; F:ubiquitin-ubiquitin ligase activity; IDA:MGI.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0000209; P:protein polyubiquitination; IDA:MGI.
13Q9SF15    456   PUB24_ARATH E3 ubiquitin-protein ligase PUB24...740.008     43.5     39     55GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.
GO:0051865; P:protein autoubiquitination; IDA:TAIR.::GO:0002679; P:respiratory burst involved in defense response; IGI:TAIR.::GO:0010200; P:response to chitin; IEP:TAIR.
14O94941    541   RNF37_HUMAN RING finger protein 37 OS=Homo sa...490.011     43.1     45     71GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
15Q9UNE7    303   CHIP_HUMAN E3 ubiquitin-protein ligase CHIP O...690.02     42     33     51GO:0005829; C:cytosol; TAS:Reactome.::GO:0042405; C:nuclear inclusion body; IDA:BHF-UCL.::GO:0031371; C:ubiquitin conjugating enzyme complex; TAS:HGNC.::GO:0000151; C:ubiquitin ligase complex; IDA:UniProtKB.
GO:0030544; F:Hsp70 protein binding; IDA:HGNC.::GO:0051879; F:Hsp90 protein binding; IDA:BHF-UCL.::GO:0019900; F:kinase binding; IPI:BHF-UCL.::GO:0051787; F:misfolded protein binding; IDA:BHF-UCL.::GO:0030674; F:protein binding, bridging; TAS:HGNC.::GO:0042803; F:protein homodimerization activity; ISS:UniProtKB.::GO:0046332; F:SMAD binding; IDA:HGNC.::GO:0030911; F:TPR domain binding; IDA:HGNC.::GO:0034450; F:ubiquitin-ubiquitin ligase activity; ISS:UniProtKB.
GO:0071218; P:cellular response to misfolded protein; IDA:BHF-UCL.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006515; P:misfolded or incompletely synthesized protein catabolic process; IDA:BHF-UCL.::GO:0090035; P:positive regulation of chaperone-mediated protein complex assembly; IDA:BHF-UCL.::GO:0032436; P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process; IDA:HGNC.::GO:0031398; P:positive regulation of protein ubiquitination; IDA:BHF-UCL.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IDA:HGNC.::GO:0051865; P:protein autoubiquitination; IDA:UniProtKB.::GO:0070534; P:protein K63-linked ubiquitination; IDA:UniProtKB.::GO:0051604; P:protein maturation; TAS:HGNC.::GO:0031943; P:regulation of glucocorticoid metabolic process; IDA:HGNC.::GO:0030579; P:ubiquitin-dependent SMAD protein catabolic process; IDA:HGNC.
16Q9WUD1    304   CHIP_MOUSE STIP1 homology and U box-containin...690.02     42     33     51GO:0005737; C:cytoplasm; ISS:HGNC.::GO:0031371; C:ubiquitin conjugating enzyme complex; TAS:HGNC.::GO:0000151; C:ubiquitin ligase complex; ISS:UniProtKB.
GO:0030544; F:Hsp70 protein binding; ISS:HGNC.::GO:0051879; F:Hsp90 protein binding; ISS:BHF-UCL.::GO:0030674; F:protein binding, bridging; TAS:HGNC.::GO:0042803; F:protein homodimerization activity; IDA:HGNC.::GO:0046332; F:SMAD binding; ISS:HGNC.::GO:0030911; F:TPR domain binding; ISS:HGNC.::GO:0031625; F:ubiquitin protein ligase binding; IPI:UniProtKB.::GO:0034450; F:ubiquitin-ubiquitin ligase activity; IDA:MGI.
GO:0071218; P:cellular response to misfolded protein; IMP:UniProtKB.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006515; P:misfolded or incompletely synthesized protein catabolic process; IMP:UniProtKB.::GO:0032436; P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process; ISS:HGNC.::GO:0031398; P:positive regulation of protein ubiquitination; ISS:HGNC.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IMP:UniProtKB.::GO:0051865; P:protein autoubiquitination; ISS:UniProtKB.::GO:0006457; P:protein folding; TAS:HGNC.::GO:0070534; P:protein K63-linked ubiquitination; ISS:UniProtKB.::GO:0051604; P:protein maturation; TAS:HGNC.::GO:0031943; P:regulation of glucocorticoid metabolic process; ISS:HGNC.::GO:0030579; P:ubiquitin-dependent SMAD protein catabolic process; ISS:HGNC.
17Q9SVC6    435   PUB22_ARATH E3 ubiquitin-protein ligase PUB22...670.032     41.6     36     57GO:0005829; C:cytosol; IDA:TAIR.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.
GO:0051865; P:protein autoubiquitination; IDA:TAIR.::GO:0002679; P:respiratory burst involved in defense response; IGI:TAIR.::GO:0010200; P:response to chitin; IEP:TAIR.::GO:0009414; P:response to water deprivation; IMP:TAIR.
18Q5ZHY5    314   CHIP_CHICK STIP1 homology and U box-containin...690.049     40.4     32     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0042803; F:protein homodimerization activity; ISS:UniProtKB.::GO:0034450; F:ubiquitin-ubiquitin ligase activity; ISS:UniProtKB.
GO:0071218; P:cellular response to misfolded protein; ISS:UniProtKB.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006515; P:misfolded or incompletely synthesized protein catabolic process; ISS:UniProtKB.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; ISS:UniProtKB.
19O81902    374   PUB8_ARATH U-box domain-containing protein 8 ...930.11     39.7     32     51GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
20Q84TG3    411   PUB23_ARATH E3 ubiquitin-protein ligase PUB23...670.13     39.7     34     57GO:0005829; C:cytosol; IDA:TAIR.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.
GO:0051865; P:protein autoubiquitination; IDA:TAIR.::GO:0002679; P:respiratory burst involved in defense response; IGI:TAIR.::GO:0010200; P:response to chitin; IEP:TAIR.::GO:0009414; P:response to water deprivation; IMP:TAIR.
21B9MQ99    457   MURD_ANATD UDP-N-acetylmuramoylalanine--D-glu...840.25     38.5     36     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008764; F:UDP-N-acetylmuramoylalanine-D-glutamate ligase activity; IEA:EC.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007047; P:cellular cell wall organization; IEA:UniProtKB-KW.::GO:0009252; P:peptidoglycan biosynthetic process; IEA:UniProtKB-KW.::GO:0008360; P:regulation of cell shape; IEA:UniProtKB-KW.
22Q5ZMC3    476   WSDU1_CHICK WD repeat, SAM and U-box domain-c...650.27     38.5     34     55GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
23Q5X159    240   LUBX_LEGPA E3 ubiquitin-protein ligase LubX O...800.41     37.4     30     51GO:0043657; C:host cell; ISS:UniProtKB.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.
GO:0009405; P:pathogenesis; ISS:UniProtKB.
24Q5VRH9    611   PUB12_ORYSJ U-box domain-containing protein 1...580.48     37.7     40     57GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.
25Q5ZRQ0    246   LUBX_LEGPH E3 ubiquitin-protein ligase LubX O...800.49     37.4     30     51GO:0043657; C:host cell; IDA:UniProtKB.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.
GO:0009405; P:pathogenesis; IDA:UniProtKB.
26Q9C8D1    431   PUB20_ARATH U-box domain-containing protein 2...650.55     37.4     35     51GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
GO:0010200; P:response to chitin; IEP:TAIR.
27Q9FHN9    444   PUB31_ARATH U-box domain-containing protein 3...900.59     37.4     30     49GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
28Q9FGD7    765   PUB50_ARATH Putative U-box domain-containing ...1220.82     37.4     25     48GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004672; F:protein kinase activity; IEA:InterPro.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
29Q9STT1    509   PUB39_ARATH U-box domain-containing protein 3...830.92     37     31     47GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
30Q9SRT0    460   PUB9_ARATH U-box domain-containing protein 9 ...911.2     36.6     34     51GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0005886; C:plasma membrane; IDA:UniProtKB.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0070696; F:transmembrane receptor protein serine/threonine kinase binding; IPI:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:TAIR.
GO:0009738; P:abscisic acid mediated signaling pathway; IEA:UniProtKB-KW.
31Q5FVN8    476   WSDU1_RAT WD repeat, SAM and U-box domain-con...941.2     36.6     29     49GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
records
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