Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL165W
Length:
191
Number of sequences:
5887
Description:
YDL165W CDC36 SGDID:S000002324, Chr IV from 164290-164865, Genome Release 64-1-1, Verified ORF, "Component of the CCR4-NOT complex, which has multiple roles in regulating mRNA levels including regulation of transcription and destabilizing mRNAs by deadenylation; basal transcription factor"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P06100    191   NOT2_YEAST General negative regulator of tran...1913e-141     398     100     100GO:0030015; C:CCR4-NOT core complex; IPI:SGD.::GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0031087; P:deadenylation-independent decapping of nuclear-transcribed mRNA; IMP:SGD.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; TAS:SGD.::GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; IDA:SGD.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IDA:SGD.::GO:0016567; P:protein ubiquitination; IMP:SGD.::GO:0051726; P:regulation of cell cycle; IMP:SGD.::GO:0000749; P:response to pheromone involved in conjugation with cellular fusion; IMP:SGD.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IMP:SGD.
2P87240    306   NOT2_SCHPO General negative regulator of tran...1912e-30     118     36     57GO:0030015; C:CCR4-NOT core complex; ISS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; ISS:PomBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:PomBase.::GO:0006354; P:transcription elongation, DNA-dependent; IC:PomBase.
3Q8C5L3    540   CNOT2_MOUSE CCR4-NOT transcription complex su...1928e-19     87.8     29     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
4Q9NZN8    540   CNOT2_HUMAN CCR4-NOT transcription complex su...1929e-19     87.4     29     51GO:0005829; C:cytosol; TAS:Reactome.::GO:0005634; C:nucleus; NAS:UniProtKB.
GO:0001104; F:RNA polymerase II transcription cofactor activity; TAS:UniProtKB.
GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; TAS:Reactome.
5Q52JK6    603   VIP2_NICBE Probable NOT transcription complex...1861e-18     87.4     30     50GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0015074; P:DNA integration; IMP:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
6Q94547    585   RGA_DROME Regulator of gene activity OS=Droso...1850.0000000000002     72.4     28     49GO:0030014; C:CCR4-NOT complex; IDA:FlyBase.::GO:0005737; C:cytoplasm; IDA:FlyBase.::GO:0005634; C:nucleus; NAS:UniProtKB.
GO:0007095; P:mitotic cell cycle G2/M transition DNA damage checkpoint; IGI:FlyBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IMP:UniProtKB.
7Q9FPW4    614   VIP2_ARATH Probable NOT transcription complex...1880.00000000003     65.5     31     48GO:0005634; C:nucleus; IDA:TAIR.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0015074; P:DNA integration; IMP:TAIR.::GO:0006355; P:regulation of transcription, DNA-dependent; IEP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
8Q8K0V4    751   CNOT3_MOUSE CCR4-NOT transcription complex su...770.0000004     52.8     35     56GO:0000932; C:cytoplasmic mRNA processing body; IDA:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
9O13870    640   NOT3_SCHPO General negative regulator of tran...810.0000004     52.8     37     53GO:0030015; C:CCR4-NOT core complex; ISS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; ISS:PomBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
10O75175    753   CNOT3_HUMAN CCR4-NOT transcription complex su...770.0000004     52.8     35     56GO:0000932; C:cytoplasmic mRNA processing body; ISS:UniProtKB.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; TAS:Reactome.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
11Q12514    560   NOT5_YEAST General negative regulator of tran...820.0002     44.7     35     56GO:0030015; C:CCR4-NOT core complex; IPI:SGD.::GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0031087; P:deadenylation-independent decapping of nuclear-transcribed mRNA; IMP:SGD.::GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; IDA:SGD.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IDA:SGD.::GO:0016567; P:protein ubiquitination; IMP:SGD.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IMP:SGD.
12P93472    567   DIM_PEA Delta(24)-sterol reductase OS=Pisum s...1770.008     40     20     39GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0050614; F:delta24-sterol reductase activity; IEA:EC.::GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.::GO:0008762; F:UDP-N-acetylmuramate dehydrogenase activity; IEA:InterPro.
13Q39085    561   DIM_ARATH Delta(24)-sterol reductase OS=Arabi...1810.52     34.7     22     41GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-KW.::GO:0016021; C:integral to membrane; IDA:TAIR.::GO:0005792; C:microsome; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IDA:TAIR.::GO:0005774; C:vacuolar membrane; IDA:TAIR.
GO:0005516; F:calmodulin binding; IDA:TAIR.::GO:0050614; F:delta24-sterol reductase activity; IEA:EC.::GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.::GO:0008762; F:UDP-N-acetylmuramate dehydrogenase activity; IEA:InterPro.
GO:0016132; P:brassinosteroid biosynthetic process; IMP:TAIR.::GO:0009808; P:lignin metabolic process; IMP:TAIR.::GO:0009834; P:secondary cell wall biogenesis; IMP:TAIR.::GO:0009826; P:unidimensional cell growth; IMP:TAIR.
14C3LM83    338   LPLA_VIBCM Lipoate-protein ligase A OS=Vibrio...755.2     31.2     24     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016979; F:lipoate-protein ligase activity; IEA:InterPro.::GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
GO:0018055; P:peptidyl-lysine lipoylation; IEA:InterPro.
15Q9KS71    338   LPLA_VIBCH Lipoate-protein ligase A OS=Vibrio...755.2     31.2     24     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016979; F:lipoate-protein ligase activity; IEA:InterPro.::GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
GO:0018055; P:peptidyl-lysine lipoylation; IEA:InterPro.
16A5F8E4    338   LPLA_VIBC3 Lipoate-protein ligase A OS=Vibrio...755.2     31.2     24     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016979; F:lipoate-protein ligase activity; IEA:InterPro.::GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
GO:0018055; P:peptidyl-lysine lipoylation; IEA:InterPro.
records
Previous ‹‹ ›› Next Total records: 16 1 - 16
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::