Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL164C
Length:
755
Number of sequences:
5887
Description:
YDL164C CDC9 SGDID:S000002323, Chr IV from 167254-164987, Genome Release 64-1-1, reverse complement, Verified ORF, "DNA ligase found in the nucleus and mitochondria, an essential enzyme that joins Okazaki fragments during DNA replication; also acts in nucleotide excision repair, base excision repair, and recombination"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
151Q6FVD8    946   DNLI4_CANGA DNA ligase 4 OS=NRRL Y-65) (Yeast...3789e-21     101     25     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003910; F:DNA ligase (ATP) activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0051103; P:DNA ligation involved in DNA repair; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
152B1ZZL9    1017   DNLI_OPITP Probable DNA ligase OS=Opitutus te...6781e-20     101     22     37
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003910; F:DNA ligase (ATP) activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0051103; P:DNA ligation involved in DNA repair; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
153Q7X7E9    1322   DNLI4_ORYSJ Putative DNA ligase 4 OS=Oryza sa...5753e-20     100     24     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003910; F:DNA ligase (ATP) activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0051103; P:DNA ligation involved in DNA repair; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
154P59971    759   Y963_MYCBO Putative DNA ligase-like protein M...2830.000000000000008     82     27     43
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003910; F:DNA ligase (ATP) activity; IEA:InterPro.::GO:0003896; F:DNA primase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0006269; P:DNA replication, synthesis of RNA primer; IEA:InterPro.
155P71571    759   Y938_MYCTU Putative DNA ligase-like protein R...2830.000000000000009     82     27     43GO:0005886; C:plasma membrane; IDA:MTBBASE.
GO:0005524; F:ATP binding; IDA:MTBBASE.::GO:0003910; F:DNA ligase (ATP) activity; IDA:MTBBASE.::GO:0003896; F:DNA primase activity; IDA:MTBBASE.::GO:0003887; F:DNA-directed DNA polymerase activity; IDA:MTBBASE.::GO:0000287; F:magnesium ion binding; IDA:MTBBASE.::GO:0030145; F:manganese ion binding; IDA:MTBBASE.::GO:0004652; F:polynucleotide adenylyltransferase activity; IDA:MTBBASE.::GO:0005515; F:protein binding; IPI:MTBBASE.::GO:0008310; F:single-stranded DNA specific 3'-5' exodeoxyribonuclease activity; IDA:MTBBASE.
GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006269; P:DNA replication, synthesis of RNA primer; IDA:MTBBASE.::GO:0006303; P:double-strand break repair via nonhomologous end joining; IDA:MTBBASE.
156O31917    270   LIGB_BACSU SPBc2 prophage-derived DNA ligase-...2150.0000005     55.5     26     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003910; F:DNA ligase (ATP) activity; ISS:RefGenome.
GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.
157O34398    611   YKOU_BACSU Probable ATP-dependent DNA ligase ...1990.0002     48.5     27     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003910; F:DNA ligase (ATP) activity; ISS:RefGenome.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IEA:UniProtKB-KW.
158Q0A6F1    273   SPED_ALHEH S-adenosylmethionine decarboxylase...1201     35.8     24     45
GO:0004014; F:adenosylmethionine decarboxylase activity; IEA:EC.
GO:0008295; P:spermidine biosynthetic process; IEA:UniProtKB-KW.
159Q4G017    1502   NISCH_RAT Nischarin OS=Rattus norvegicus (Rat...862.7     35.4     28     44GO:0005769; C:early endosome; IEA:UniProtKB-SubCell.::GO:0005624; C:membrane fraction; IDA:RGD.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0055037; C:recycling endosome; IEA:UniProtKB-SubCell.
GO:0008227; F:G-protein coupled amine receptor activity; IDA:RGD.::GO:0035091; F:phosphatidylinositol binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0006006; P:glucose metabolic process; IMP:RGD.::GO:0048243; P:norepinephrine secretion; IMP:RGD.::GO:0008217; P:regulation of blood pressure; IMP:RGD.::GO:0032228; P:regulation of synaptic transmission, GABAergic; IMP:RGD.
160Q8U9L4    435   TOLB_AGRT5 Protein TolB OS=Agrobacterium tume...787.3     33.5     28     50GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
GO:0017038; P:protein import; IEA:InterPro.
records
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