Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL150W
Length:
422
Number of sequences:
5887
Description:
YDL150W RPC53 SGDID:S000002309, Chr IV from 183343-184611, Genome Release 64-1-1, Verified ORF, "RNA polymerase III subunit C53"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P25441    422   RPC4_YEAST DNA-directed RNA polymerase III su...4220     845     100     100GO:0005666; C:DNA-directed RNA polymerase III complex; IDA:SGD.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0042797; P:tRNA transcription from RNA polymerase III promoter; IDA:SGD.
2Q91WD1    398   RPC4_MOUSE DNA-directed RNA polymerase III su...1380.00000007     57.8     29     54GO:0005666; C:DNA-directed RNA polymerase III complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0045089; P:positive regulation of innate immune response; ISS:UniProtKB.::GO:0032728; P:positive regulation of interferon-beta production; ISS:UniProtKB.::GO:0009615; P:response to virus; IEA:UniProtKB-KW.::GO:0006383; P:transcription from RNA polymerase III promoter; IEA:InterPro.
3P05423    398   RPC4_HUMAN DNA-directed RNA polymerase III su...1380.0000005     55.1     29     54GO:0005666; C:DNA-directed RNA polymerase III complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0045089; P:positive regulation of innate immune response; IDA:UniProtKB.::GO:0032728; P:positive regulation of interferon-beta production; IDA:UniProtKB.::GO:0009615; P:response to virus; IEA:UniProtKB-KW.::GO:0006386; P:termination of RNA polymerase III transcription; TAS:Reactome.::GO:0006385; P:transcription elongation from RNA polymerase III promoter; TAS:Reactome.
4Q5E9Z7    398   RPC4_BOVIN DNA-directed RNA polymerase III su...1260.000002     53.5     27     54GO:0005666; C:DNA-directed RNA polymerase III complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0045089; P:positive regulation of innate immune response; ISS:UniProtKB.::GO:0032728; P:positive regulation of interferon-beta production; ISS:UniProtKB.::GO:0009615; P:response to virus; IEA:UniProtKB-KW.::GO:0006383; P:transcription from RNA polymerase III promoter; IEA:InterPro.
5O74857    330   RPC4_SCHPO DNA-directed RNA polymerase III su...1380.00002     50.1     28     49GO:0005829; C:cytosol; IDA:PomBase.::GO:0005666; C:DNA-directed RNA polymerase III complex; ISS:PomBase.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0006383; P:transcription from RNA polymerase III promoter; ISS:PomBase.
6Q8T1V7    430   RPC4_DICDI DNA-directed RNA polymerase III su...750.0007     45.4     33     56GO:0005666; C:DNA-directed RNA polymerase III complex; ISS:dictyBase.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; ISS:dictyBase.
GO:0006383; P:transcription from RNA polymerase III promoter; ISS:dictyBase.
7P02469    1786   LAMB1_MOUSE Laminin subunit beta-1 OS=Mus mus...1921.6     35     24     44GO:0005606; C:laminin-1 complex; IDA:MGI.::GO:0043259; C:laminin-10 complex; IPI:MGI.::GO:0005607; C:laminin-2 complex; ISS:HGNC.::GO:0043257; C:laminin-8 complex; ISS:HGNC.::GO:0048471; C:perinuclear region of cytoplasm; IDA:UniProtKB.
GO:0019899; F:enzyme binding; IPI:MGI.::GO:0005201; F:extracellular matrix structural constituent; ISS:HGNC.::GO:0043208; F:glycosphingolipid binding; IDA:MGI.::GO:0005178; F:integrin binding; IMP:MGI.
GO:0007155; P:cell adhesion; IEA:UniProtKB-KW.::GO:0016477; P:cell migration; IMP:MGI.::GO:0007566; P:embryo implantation; IMP:MGI.::GO:0007611; P:learning or memory; NAS:UniProtKB.::GO:0007162; P:negative regulation of cell adhesion; IDA:UniProtKB.::GO:0031175; P:neuron projection development; IDA:MGI.::GO:0042476; P:odontogenesis; ISS:HGNC.::GO:0030335; P:positive regulation of cell migration; ISS:HGNC.
8Q15147    1175   PLCB4_HUMAN 1-phosphatidylinositol 4,5-bispho...1353.8     33.9     27     44GO:0005829; C:cytosol; TAS:Reactome.
GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0004435; F:phosphatidylinositol phospholipase C activity; IEA:EC.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0035556; P:intracellular signal transduction; IEA:InterPro.::GO:0016042; P:lipid catabolic process; IEA:UniProtKB-KW.
9Q5SXJ3    1174   FANCJ_MOUSE Fanconi anemia group J protein ho...1024.1     33.5     25     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
10A2QPW4    412   CIAO1_ASPNC Probable cytosolic iron-sulfur pr...847.5     32.3     30     46
records
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