Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL145C
Length:
1201
Number of sequences:
5887
Description:
YDL145C COP1 SGDID:S000002304, Chr IV from 198176-194571, Genome Release 64-1-1, reverse complement, Verified ORF, "Alpha subunit of COPI vesicle coatomer complex, which surrounds transport vesicles in the early secretory pathway"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
871Q03177    834   YMZ2_YEAST WD repeat-containing protein YMR10...590.00002     52.8     39     59
872Q2UPI0    438   CIAO1_ASPOR Probable cytosolic iron-sulfur pr...1030.8     37.4     26     42
873B8MWR8    438   CIAO1_ASPFN Probable cytosolic iron-sulfur pr...1030.8     37.4     26     42
874P46680    615   AIP1_YEAST Actin-interacting protein 1 OS=Sac...1680.00002     52.8     27     44GO:0030479; C:actin cortical patch; TAS:SGD.::GO:0043332; C:mating projection tip; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0003779; F:actin binding; IPI:UniProtKB.
GO:0030042; P:actin filament depolymerization; IPI:SGD.::GO:0006970; P:response to osmotic stress; TAS:SGD.
875Q8BUB4    400   WDFY2_MOUSE WD repeat and FYVE domain-contain...1030.008     43.5     25     47
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
876P87314    932   HIR1_SCHPO Protein hir1 OS=Schizosaccharomyce...2830.009     44.3     18     32GO:0005829; C:cytosol; IDA:PomBase.::GO:0000417; C:HIR complex; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.
GO:0003682; F:chromatin binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003714; F:transcription corepressor activity; TAS:PomBase.
GO:0006995; P:cellular response to nitrogen starvation; IMP:PomBase.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0030702; P:chromatin silencing at centromere; IMP:PomBase.::GO:0030466; P:chromatin silencing at silent mating-type cassette; IMP:PomBase.::GO:0006336; P:DNA replication-independent nucleosome assembly; TAS:PomBase.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0007070; P:negative regulation of transcription from RNA polymerase II promoter during mitosis; IMP:PomBase.::GO:0007346; P:regulation of mitotic cell cycle; IMP:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
877Q8NAA4    619   A16L2_HUMAN Autophagy-related protein 16-2 OS...790.22     39.3     24     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
878P43254    675   COP1_ARATH E3 ubiquitin-protein ligase COP1 O...1380.00002     52.4     25     44GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000152; C:nuclear ubiquitin ligase complex; TAS:TAIR.
GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0046283; P:anthocyanin metabolic process; IMP:TAIR.::GO:0006281; P:DNA repair; IMP:TAIR.::GO:0009649; P:entrainment of circadian clock; IMP:TAIR.::GO:0009640; P:photomorphogenesis; IGI:TAIR.::GO:0048573; P:photoperiodism, flowering; IMP:TAIR.::GO:0009585; P:red, far-red light phototransduction; IEA:UniProtKB-KW.::GO:0010119; P:regulation of stomatal movement; IMP:TAIR.::GO:0009641; P:shade avoidance; IMP:TAIR.::GO:0009647; P:skotomorphogenesis; TAS:TAIR.
879Q6C553    1058   HIR1_YARLI Protein HIR1 OS=lipolytica). GN=HI...643     35.8     23     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
880A8ID74    797   BOP1_CHLRE Ribosome biogenesis protein BOP1 h...2120.02     42.7     23     37GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
881Q54JS5    1023   WDR24_DICDI WD repeat-containing protein 24 h...920.055     41.6     27     52
882Q6KAU8    623   A16L2_MOUSE Autophagy-related protein 16-2 OS...790.13     40     24     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
883Q9DCE5    382   PK1IP_MOUSE p21-activated protein kinase-inte...820.24     38.9     29     48GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0009968; P:negative regulation of signal transduction; IEA:UniProtKB-KW.
884B4JB43    326   EIF3I_DROGR Eukaryotic translation initiation...372.9     35.4     38     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
885B6H7A3    455   CIAO1_PENCW Probable cytosolic iron-sulfur pr...1820.00004     51.2     25     43
886Q1DIW7    668   MDV1_COCIM Mitochondrial division protein 1 O...1010.52     38.1     22     47GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
887Q74ZN0    825   HIR1_ASHGO Protein HIR1 OS=Y-1056) (Yeast) (E...1850.43     38.5     23     40GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0016539; P:intein-mediated protein splicing; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
888A5DST9    491   YTM1_LODEL Ribosome biogenesis protein YTM1 O...2930.00002     52     26     36GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
889Q29L19    326   EIF3I_DROPS Eukaryotic translation initiation...2870.016     42.7     21     36GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
890B4GSH1    326   EIF3I_DROPE Eukaryotic translation initiation...2870.016     42.7     21     36GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
891Q62871    638   DC1I2_RAT Cytoplasmic dynein 1 intermediate c...890.00003     52     31     49GO:0030286; C:dynein complex; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0031982; C:vesicle; ISS:UniProtKB.
GO:0003774; F:motor activity; IEA:UniProtKB-KW.
GO:0007018; P:microtubule-based movement; TAS:RGD.::GO:0006810; P:transport; IEA:UniProtKB-KW.
892Q8MYE8    425   PAAF1_DICDI Probable proteasomal ATPase-assoc...980.35     38.5     28     42GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
893O94967    919   WDR47_HUMAN WD repeat-containing protein 47 O...1430.04     42     20     44
894Q5R1S9    566   CAF1B_CHICK Chromatin assembly factor 1 subun...1630.0001     50.1     25     39GO:0033186; C:CAF-1 complex; ISS:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0031497; P:chromatin assembly; ISS:UniProtKB.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
895B4HN85    784   BOP1_DROSE Ribosome biogenesis protein BOP1 h...456.7     34.7     36     51GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
896A6QM06    1278   SCAP_BOVIN Sterol regulatory element-binding ...1230.00003     52.4     27     48GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008203; P:cholesterol metabolic process; IEA:UniProtKB-KW.
897B4HWV6    420   WDR12_DROSE Ribosome biogenesis protein WDR12...2210.017     42.7     21     38GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
898A7RHG8    416   WDR12_NEMVE Ribosome biogenesis protein WDR12...1360.00003     51.6     26     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
899Q5MNU5    1279   SCAP_PIG Sterol regulatory element-binding pr...1160.00003     52.4     27     48GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008203; P:cholesterol metabolic process; IEA:UniProtKB-KW.
900Q86HX1    1114   HIRA_DICDI Protein HIRA OS=Dictyostelium disc...1490.019     43.1     24     41GO:0005634; C:nucleus; ISS:dictyBase.
GO:0003682; F:chromatin binding; IEA:InterPro.::GO:0003714; F:transcription corepressor activity; ISS:dictyBase.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:dictyBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
901Q148I1    392   PAAF1_BOVIN Proteasomal ATPase-associated fac...637.5     34.3     29     49GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
records
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