Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL145C
Length:
1201
Number of sequences:
5887
Description:
YDL145C COP1 SGDID:S000002304, Chr IV from 198176-194571, Genome Release 64-1-1, reverse complement, Verified ORF, "Alpha subunit of COPI vesicle coatomer complex, which surrounds transport vesicles in the early secretory pathway"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
751Q5XI13    445   GRWD1_RAT Glutamate-rich WD repeat-containing...990.038     41.6     28     48GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
752Q6CIH3    791   ERB1_KLULA Ribosome biogenesis protein ERB1 O...2450.014     43.5     22     37GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
753A1CXL0    488   YTM1_NEOFI Ribosome biogenesis protein ytm1 O...2400.003     45.4     25     36GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
754Q7ZW33    517   UTP15_DANRE U3 small nucleolar RNA-associated...2400.000009     53.5     22     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
755Q9I8G9    424   RBBP7_CHICK Histone-binding protein RBBP7 OS=...1020.059     40.8     32     50GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.::GO:0016581; C:NuRD complex; ISS:AgBase.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:AgBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
756P29387    340   GBB4_MOUSE Guanine nucleotide-binding protein...2310.008     43.5     23     39
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007186; P:G-protein coupled receptor signaling pathway; TAS:MGI.
757O35353    340   GBB4_RAT Guanine nucleotide-binding protein s...2310.006     43.9     23     39
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
758Q9BRX9    315   WDR83_HUMAN WD repeat domain-containing prote...640.012     42.7     33     53GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.
759P79959    340   GBB1_XENLA Guanine nucleotide-binding protein...2310.35     38.5     22     39
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
760Q8AVH1    425   RBBP7_XENLA Histone-binding protein RBBP7 OS=...1020.03     42     33     50GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
761A2QI22    490   YTM1_ASPNC Ribosome biogenesis protein ytm1 O...1210.25     39.3     31     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
762B3RQN1    432   WDR12_TRIAD Ribosome biogenesis protein WDR12...2910.000003     54.7     26     41GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
763Q6P315    425   RBBP7_XENTR Histone-binding protein RBBP7 OS=...1020.008     43.9     34     50GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
764Q8BU03    919   PWP2_MOUSE Periodic tryptophan protein 2 homo...1400.0002     49.7     31     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
765B2VR76    781   ERB1_PYRTR Ribosome biogenesis protein erb1 O...1222     36.2     25     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
766Q54H44    325   WDR83_DICDI WD repeat domain-containing prote...2951.3     36.6     20     41GO:0005737; C:cytoplasm; ISS:UniProtKB.
767Q0CCS0    422   CIAO1_ASPTN Probable cytosolic iron-sulfur pr...980.37     38.5     30     43
768Q5F3D7    520   UTP15_CHICK U3 small nucleolar RNA-associated...828.3     34.3     26     48GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
769Q4V837    710   DTLA_XENLA Denticleless protein homolog A OS=...1110.43     38.5     27     42GO:0005813; C:centrosome; ISS:UniProtKB.::GO:0031464; C:Cul4A-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0031465; C:Cul4B-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0031572; P:G2/M transition DNA damage checkpoint; ISS:UniProtKB.::GO:0006513; P:protein monoubiquitination; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; ISS:UniProtKB.::GO:0009411; P:response to UV; ISS:UniProtKB.::GO:0019985; P:translesion synthesis; ISS:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
770Q38884    328   EIF3I_ARATH Eukaryotic translation initiation...2260.000001     55.5     22     40GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005829; C:cytosol; IDA:TAIR.
GO:0005515; F:protein binding; IPI:TAIR.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0046686; P:response to cadmium ion; IEP:TAIR.::GO:0009651; P:response to salt stress; IEP:TAIR.
771Q6P1W0    713   DTL_XENTR Denticleless protein homolog OS=Xen...692.7     35.8     29     46GO:0005813; C:centrosome; ISS:UniProtKB.::GO:0031464; C:Cul4A-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0031465; C:Cul4B-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006513; P:protein monoubiquitination; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; ISS:UniProtKB.::GO:0009411; P:response to UV; ISS:UniProtKB.::GO:0019985; P:translesion synthesis; ISS:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
772Q2UGK1    487   YTM1_ASPOR Ribosome biogenesis protein ytm1 O...2080.002     46.2     25     39GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
773Q8CGF6    920   WDR47_MOUSE WD repeat-containing protein 47 O...1430.04     42     20     44
774B4P116    420   WDR12_DROYA Ribosome biogenesis protein WDR12...2210.003     45.1     22     40GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
775Q7RZI0    1035   HIR1_NEUCR Protein hir-1 OS=1257 / FGSC 987)....644.6     35     28     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
776A1CQL6    453   CIAO1_ASPCL Probable cytosolic iron-sulfur pr...1040.24     39.3     26     43
777Q1JQD2    446   GRWD1_BOVIN Glutamate-rich WD repeat-containi...1290.001     46.6     29     49GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
778A5E2R6    415   CIAO1_LODEL Probable cytosolic iron-sulfur pr...1407.1     34.3     24     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
779Q6TMK6    340   GBB1_CRIGR Guanine nucleotide-binding protein...2870.00003     51.2     22     37
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
780A5DL92    453   YTM1_PICGU Ribosome biogenesis protein YTM1 O...2900.000002     55.5     25     39GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
781O16519    620   GAD1_CAEEL Gastrulation defective protein 1 O...1680.027     42.4     21     39
GO:0005515; F:protein binding; IPI:IntAct.
GO:0042074; P:cell migration involved in gastrulation; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0000132; P:establishment of mitotic spindle orientation; IMP:WormBase.::GO:0007346; P:regulation of mitotic cell cycle; IMP:WormBase.
records
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