Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL145C
Length:
1201
Number of sequences:
5887
Description:
YDL145C COP1 SGDID:S000002304, Chr IV from 198176-194571, Genome Release 64-1-1, reverse complement, Verified ORF, "Alpha subunit of COPI vesicle coatomer complex, which surrounds transport vesicles in the early secretory pathway"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
391O94620    340   CWF17_SCHPO Pre-mRNA-splicing factor cwf17 OS...2010.084     40.4     20     38GO:0005681; C:spliceosomal complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; IC:PomBase.
392Q05946    817   UTP13_YEAST U3 small nucleolar RNA-associated...1244.5     35     22     44GO:0034388; C:Pwp2p-containing subcomplex of 90S preribosome; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0030515; F:snoRNA binding; IPI:SGD.
GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.
393Q58D20    485   NLE1_BOVIN Notchless protein homolog 1 OS=Bos...1070.000001     56.6     30     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
394Q5XGI5    314   WDR83_XENTR WD repeat domain-containing prote...2260.0001     49.3     23     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
395Q8VEJ4    485   NLE1_MOUSE Notchless protein homolog 1 OS=Mus...1070.0000007     57     31     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0001826; P:inner cell mass cell differentiation; IMP:MGI.::GO:0007219; P:Notch signaling pathway; IDA:MGI.
396Q5RFF8    485   NLE1_PONAB Notchless protein homolog 1 OS=Pon...1220.0000002     58.9     30     41GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
397Q7RY68    660   PFS2_NEUCR Polyadenylation factor subunit 2 O...2280.00000000002     71.6     24     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
398Q9NVX2    485   NLE1_HUMAN Notchless protein homolog 1 OS=Hom...1220.0000001     59.3     30     41GO:0005730; C:nucleolus; IDA:HPA.
399P25635    923   PWP2_YEAST Periodic tryptophan protein 2 OS=S...804.4     35.4     28     44GO:0005737; C:cytoplasm; IDA:SGD.::GO:0034388; C:Pwp2p-containing subcomplex of 90S preribosome; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0030515; F:snoRNA binding; IPI:SGD.
GO:0000910; P:cytokinesis; IMP:SGD.::GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0030010; P:establishment of cell polarity; IMP:SGD.
400Q21215    325   GBLP_CAEEL Guanine nucleotide-binding protein...1650.00003     50.8     25     42GO:0030424; C:axon; IDA:WormBase.::GO:0044297; C:cell body; IDA:WormBase.::GO:0005813; C:centrosome; IDA:WormBase.::GO:0030426; C:growth cone; IDA:WormBase.::GO:0000776; C:kinetochore; IDA:WormBase.::GO:0005635; C:nuclear envelope; IDA:WormBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0048675; P:axon extension; IMP:WormBase.::GO:0051304; P:chromosome separation; IMP:WormBase.::GO:0000281; P:cytokinesis after mitosis; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0008045; P:motor axon guidance; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0006997; P:nucleus organization; IMP:WormBase.::GO:0018991; P:oviposition; IMP:WormBase.::GO:0040038; P:polar body extrusion after meiotic divisions; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0040017; P:positive regulation of locomotion; IMP:WormBase.::GO:0033365; P:protein localization to organelle; IMP:WormBase.::GO:0030334; P:regulation of cell migration; IMP:WormBase.
401Q54LT8    293   STRAP_DICDI Serine-threonine kinase receptor-...2640.0002     48.1     21     41
GO:0004872; F:receptor activity; ISS:dictyBase.
GO:0030512; P:negative regulation of transforming growth factor beta receptor signaling pathway; ISS:dictyBase.
402Q8K4P0    1330   WDR33_MOUSE pre-mRNA 3' end processing protei...2580.0000000002     69.7     24     39GO:0005581; C:collagen; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IDA:MGI.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
403Q9C0J8    1336   WDR33_HUMAN pre-mRNA 3' end processing protei...2580.0000000001     69.7     24     39GO:0005581; C:collagen; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006301; P:postreplication repair; NAS:UniProtKB.::GO:0007283; P:spermatogenesis; NAS:UniProtKB.
404Q01277    650   SCONB_NEUCR Probable E3 ubiquitin ligase comp...1040.024     42.4     31     42
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
405Q3UKJ7    513   SMU1_MOUSE WD40 repeat-containing protein SMU...2470.027     42.4     21     36GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
406Q2TAY7    513   SMU1_HUMAN WD40 repeat-containing protein SMU...2470.027     42.4     21     36GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
407Q76B40    513   SMU1_CRIGR WD40 repeat-containing protein SMU...2470.027     42.4     21     36GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
408Q2TBS9    513   SMU1_BOVIN WD40 repeat-containing protein SMU...2470.027     42.4     21     36GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
409Q99M63    513   SMU1_RAT WD40 repeat-containing protein SMU1 ...2480.028     42     22     37GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
410B0X2V9    670   WDR48_CULQU WD repeat-containing protein 48 h...1560.001     46.6     22     40
411Q5ZME8    513   SMU1_CHICK WD40 repeat-containing protein SMU...2470.028     42.4     22     36GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
412B6K1G6    616   CFD1_SCHJY Probable cytosolic Fe-S cluster as...1580.24     39.3     25     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
413Q9W5Z5    427   WSB1_TAKRU WD repeat and SOCS box-containing ...1170.001     46.2     26     50
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
414Q99KN2    339   CIAO1_MOUSE Probable cytosolic iron-sulfur pr...1420.000006     53.5     27     42GO:0071817; C:MMXD complex; ISS:UniProtKB.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:MGI.
GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; TAS:MGI.
415B6GZA1    673   SCONB_PENCW Probable E3 ubiquitin ligase comp...990.088     40.8     25     47
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
416P70483    780   STRN_RAT Striatin OS=Rattus norvegicus (Rat)....3090.007     44.3     22     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0043025; C:neuronal cell body; IDA:RGD.::GO:0014069; C:postsynaptic density; IDA:RGD.::GO:0045211; C:postsynaptic membrane; IDA:RGD.
GO:0048306; F:calcium-dependent protein binding; NAS:RGD.::GO:0005516; F:calmodulin binding; IDA:RGD.
GO:0016358; P:dendrite development; IMP:RGD.::GO:0007626; P:locomotory behavior; IMP:RGD.
417P74598    348   Y1491_SYNY3 Uncharacterized WD repeat-contain...380.43     38.1     45     63GO:0030288; C:outer membrane-bounded periplasmic space; IDA:UniProtKB.
418Q6P1V3    422   WSB1_XENTR WD repeat and SOCS box-containing ...1640.089     40.4     21     36
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
419Q8C7V3    528   UTP15_MOUSE U3 small nucleolar RNA-associated...820.31     38.9     28     50GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
420Q6P4J8    513   SMU1_XENTR WD40 repeat-containing protein SMU...910.054     41.2     26     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
421O74319    642   TAF73_SCHPO Transcription initiation factor T...1150.0002     49.7     30     46GO:0005829; C:cytosol; IDA:PomBase.::GO:0005669; C:transcription factor TFIID complex; TAS:PomBase.
GO:0000991; F:core RNA polymerase II binding transcription factor activity; IC:PomBase.
GO:0030071; P:regulation of mitotic metaphase/anaphase transition; IGI:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:PomBase.
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