Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL140C
Length:
1733
Number of sequences:
5887
Description:
YDL140C RPO21 SGDID:S000002299, Chr IV from 210561-205360, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA polymerase II largest subunit B220, part of central core; phosphorylation of C-terminal heptapeptide repeat domain regulates association with transcription and splicing factors; similar to bacterial beta-prime"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
91B0KCJ3    1184   RPOC_THEP3 DNA-directed RNA polymerase subuni...1460.053     42.4     23     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
92Q6GJC5    1207   RPOC_STAAR DNA-directed RNA polymerase subuni...1690.0006     48.5     25     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
93Q2FJ97    1207   RPOC_STAA3 DNA-directed RNA polymerase subuni...1690.0006     48.5     25     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
94P60286    1207   RPOC_STAAW DNA-directed RNA polymerase subuni...1690.0006     48.5     25     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
95Q6GBU4    1207   RPOC_STAAS DNA-directed RNA polymerase subuni...1690.0006     48.5     25     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
96P60285    1207   RPOC_STAAN DNA-directed RNA polymerase subuni...1690.0006     48.5     25     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
97P60284    1207   RPOC_STAAM DNA-directed RNA polymerase subuni...1690.0006     48.5     25     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
98Q5HID2    1207   RPOC_STAAC DNA-directed RNA polymerase subuni...1690.0006     48.5     25     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
99Q2G0N5    1207   RPOC_STAA8 DNA-directed RNA polymerase subuni...1690.0006     48.5     25     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
100Q2YSB8    1207   RPOC_STAAB DNA-directed RNA polymerase subuni...1690.0006     48.5     25     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
101Q046D1    1223   RPOC_LACGA DNA-directed RNA polymerase subuni...640.8     38.1     33     53
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
102A2RC52    1213   RPOC_STRPG DNA-directed RNA polymerase subuni...1690.16     40.8     24     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
103C0MEE4    1211   RPOC_STRS7 DNA-directed RNA polymerase subuni...430.35     39.3     42     60
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
104Q4L3K4    1206   RPOC_STAHJ DNA-directed RNA polymerase subuni...1690.0006     48.5     25     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
105P0C1T4    1057   RPOC_STAAU DNA-directed RNA polymerase subuni...870.000000001     67.4     43     61
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
106C5A207    391   RPOA2_THEGJ DNA-directed RNA polymerase subun...4152e-58     213     33     52
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
107P0DF33    1207   RPOC_STRPQ DNA-directed RNA polymerase subuni...1690.15     40.8     24     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
108P14247    386   RPOA2_METVS DNA-directed RNA polymerase subun...4283e-58     213     33     52
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
109Q3A9Q8    1152   RPOC_CARHZ DNA-directed RNA polymerase subuni...1440.002     47     26     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
110Q5XE96    1213   RPOC_STRP6 DNA-directed RNA polymerase subuni...1690.15     40.8     24     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
111P29158    393   RPOA2_THECE DNA-directed RNA polymerase subun...4156e-58     212     33     51
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
112Q250N9    1161   RPOC_DESHY DNA-directed RNA polymerase subuni...1460.005     45.4     27     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
113Q0AUH3    1181   RPOC_SYNWW DNA-directed RNA polymerase subuni...1460.018     43.5     24     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
114P0DF32    1207   RPOC_STRP3 DNA-directed RNA polymerase subuni...1690.15     40.8     24     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
115A6UV49    397   RPOA2_META3 DNA-directed RNA polymerase subun...4339e-58     212     33     52
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
116Q1J8X0    1213   RPOC_STRPF DNA-directed RNA polymerase subuni...1690.15     40.8     24     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
117Q8E238    1216   RPOC_STRA5 DNA-directed RNA polymerase subuni...430.37     39.3     42     60
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
118Q8E7J7    1216   RPOC_STRA3 DNA-directed RNA polymerase subuni...430.37     39.3     42     60
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
119Q3K3L1    1216   RPOC_STRA1 DNA-directed RNA polymerase subuni...430.37     39.3     42     60
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
120Q8P2Y2    1213   RPOC_STRP8 DNA-directed RNA polymerase subuni...1690.15     40.8     24     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
121Q1JJ22    1213   RPOC_STRPD DNA-directed RNA polymerase subuni...1690.15     40.8     24     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
records
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