Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL140C
Length:
1733
Number of sequences:
5887
Description:
YDL140C RPO21 SGDID:S000002299, Chr IV from 210561-205360, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA polymerase II largest subunit B220, part of central core; phosphorylation of C-terminal heptapeptide repeat domain regulates association with transcription and splicing factors; similar to bacterial beta-prime"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
901Q4VZP2    680   RPOC1_CUCSA DNA-directed RNA polymerase subun...3087e-33     141     32     47GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
902P11414    467   RPB1_CRIGR DNA-directed RNA polymerase II sub...1037e-27     120     75     86GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0006468; P:protein phosphorylation; ISS:GOC.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB.
903A8SE82    680   RPOC1_CERDE DNA-directed RNA polymerase subun...3098e-33     140     32     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
904Q3V543    682   RPOC1_ACOCL DNA-directed RNA polymerase subun...3099e-33     140     32     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
905A9LYH6    682   RPOC1_ACOAM DNA-directed RNA polymerase subun...3099e-33     140     32     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
906Q91FI1    462   343L_IIV6 Probable DNA-directed RNA polymeras...4149e-33     139     30     48
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
907Q5QA71    682   RPOC1_ACOGR DNA-directed RNA polymerase subun...3091e-32     140     32     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
908A6MM27    685   RPOC1_BUXMI DNA-directed RNA polymerase subun...3081e-32     140     32     47GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
909Q09FX0    680   RPOC1_NANDO DNA-directed RNA polymerase subun...3081e-32     140     32     47GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
910A5IZ52    1478   RPOC_MYCAP DNA-directed RNA polymerase subuni...440.17     40.4     41     61
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
911Q06GR9    688   RPOC1_PIPCE DNA-directed RNA polymerase subun...3092e-32     140     32     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
912Q98Q24    1426   RPOC_MYCPU DNA-directed RNA polymerase subuni...610.85     38.1     38     56
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
913B0Z5C8    679   RPOC1_OENPA DNA-directed RNA polymerase subun...3123e-32     139     32     46GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
914B0Z544    679   RPOC1_OENGL DNA-directed RNA polymerase subun...3123e-32     139     32     46GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
915Q9MTM4    679   RPOC1_OENEH DNA-directed RNA polymerase subun...3123e-32     139     32     46GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
916B0Z4W0    679   RPOC1_OENBI DNA-directed RNA polymerase subun...3123e-32     139     32     46GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
917B0Z4M6    679   RPOC1_OENAR DNA-directed RNA polymerase subun...3123e-32     139     32     46GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
918Q0G9M8    681   RPOC1_LIRTU DNA-directed RNA polymerase subun...3574e-32     139     30     46GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
919Q7YJX9    678   RPOC1_CALFG DNA-directed RNA polymerase subun...3094e-32     139     32     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
920A4GGA6    684   RPOC1_PHAVU DNA-directed RNA polymerase subun...3074e-32     138     33     47GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
921Q32RY3    834   RPOC1_STAPU DNA-directed RNA polymerase subun...3126e-32     139     33     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
922A0ZZ26    694   RPOC1_GOSBA DNA-directed RNA polymerase subun...3088e-32     138     32     47GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
923P60287    680   RPOC1_AMBTC DNA-directed RNA polymerase subun...3098e-32     137     32     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
924A6MMJ8    685   RPOC1_DIOEL DNA-directed RNA polymerase subun...3091e-31     137     31     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
925Q2VEI5    687   RPOC1_SOLTU DNA-directed RNA polymerase subun...3081e-31     137     31     47GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
926P07392    1287   RP147_VACCW DNA-directed RNA polymerase 147 k...1040.000003     56.2     28     52GO:0019012; C:virion; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
927B2X1Z3    1947   RPOC1_OEDCA DNA-directed RNA polymerase subun...3162e-31     139     31     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
928P20504    1286   RP147_VACCC DNA-directed RNA polymerase 147 k...1040.000002     56.6     28     52GO:0019012; C:virion; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
929O57204    1286   RP147_VACCA DNA-directed RNA polymerase 147 k...1040.000002     57     28     52GO:0019012; C:virion; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
930Q9J593    1287   RP147_FOWPN DNA-directed RNA polymerase 147 k...1040.0002     50.4     27     52GO:0019012; C:virion; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
931Q06H06    681   RPOC1_DRIGR DNA-directed RNA polymerase subun...3094e-31     135     32     47GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
records
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