Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL140C
Length:
1733
Number of sequences:
5887
Description:
YDL140C RPO21 SGDID:S000002299, Chr IV from 210561-205360, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA polymerase II largest subunit B220, part of central core; phosphorylation of C-terminal heptapeptide repeat domain regulates association with transcription and splicing factors; similar to bacterial beta-prime"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
871Q8S8Y0    681   RPOC1_ATRBE DNA-directed RNA polymerase subun...3085e-34     144     32     47GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
872Q0P3M5    740   RPOC1_OSTTA DNA-directed RNA polymerase subun...3105e-34     145     31     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
873Q9XPS8    683   RPOC1_WHEAT DNA-directed RNA polymerase subun...3556e-34     144     30     46GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
874A7Y3B6    687   RPOC1_IPOPU DNA-directed RNA polymerase subun...3086e-34     144     32     47GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
875Q6ENX2    683   RPOC1_SACOF DNA-directed RNA polymerase subun...3556e-34     144     30     46GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
876Q6L3A6    683   RPOC1_SACHY DNA-directed RNA polymerase subun...3556e-34     144     30     46GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
877Q3C1G8    681   RPOC1_NICSY DNA-directed RNA polymerase subun...3086e-34     144     32     47GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
878Q0ZJ29    682   RPOC1_VITVI DNA-directed RNA polymerase subun...3086e-34     144     32     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
879Q2MIA9    681   RPOC1_SOLLC DNA-directed RNA polymerase subun...3086e-34     144     32     47GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
880Q2MIJ6    681   RPOC1_SOLBU DNA-directed RNA polymerase subun...3086e-34     144     32     47GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
881A1E9R5    683   RPOC1_SORBI DNA-directed RNA polymerase subun...3557e-34     144     30     46GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
882P12116    680   RPOC1_TOBAC DNA-directed RNA polymerase subun...3087e-34     144     32     47GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
883P0C506    682   RPOC1_ORYSJ DNA-directed RNA polymerase subun...3557e-34     144     30     46GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
884P0C505    682   RPOC1_ORYSI DNA-directed RNA polymerase subun...3557e-34     144     30     46GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
885P0C504    682   RPOC1_ORYSA DNA-directed RNA polymerase subun...3557e-34     144     30     46GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
886Q6ENI3    682   RPOC1_ORYNI DNA-directed RNA polymerase subun...3557e-34     144     30     46GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
887Q33C47    681   RPOC1_NICTO DNA-directed RNA polymerase subun...3088e-34     144     32     47GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
888P16024    683   RPOC1_MAIZE DNA-directed RNA polymerase subun...3558e-34     144     30     46GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
889Q9BBS8    682   RPOC1_LOTJA DNA-directed RNA polymerase subun...3579e-34     144     30     46GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
890Q49L07    682   RPOC1_EUCGG DNA-directed RNA polymerase subun...3089e-34     144     33     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
891A6MMB3    688   RPOC1_CHLSC DNA-directed RNA polymerase subun...3099e-34     144     32     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
892A4QKS2    680   RPOC1_CRUWA DNA-directed RNA polymerase subun...3081e-33     143     33     47GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
893A6H5F8    681   RPOC1_CYCTA DNA-directed RNA polymerase subun...3102e-33     142     34     47GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
894A4GYP9    689   RPOC1_POPTR DNA-directed RNA polymerase subun...3082e-33     142     32     47GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
895Q14FG6    682   RPOC1_POPAL DNA-directed RNA polymerase subun...3082e-33     142     32     47GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
896Q32RG1    715   RPOC1_ZYGCR DNA-directed RNA polymerase subun...3143e-33     142     32     49GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
897Q8HVY4    687   RPOC1_SOYBN DNA-directed RNA polymerase subun...3084e-33     142     32     47GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
898Q09X26    684   RPOC1_MORIN DNA-directed RNA polymerase subun...3084e-33     141     33     47GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
899Q05FH9    1292   RPOC_CARRP DNA-directed RNA polymerase subuni...392.1     37     41     62
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
900A1XGM9    680   RPOC1_RANMC DNA-directed RNA polymerase subun...3095e-33     141     32     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
901Q4VZP2    680   RPOC1_CUCSA DNA-directed RNA polymerase subun...3087e-33     141     32     47GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
records
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