Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL140C
Length:
1733
Number of sequences:
5887
Description:
YDL140C RPO21 SGDID:S000002299, Chr IV from 210561-205360, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA polymerase II largest subunit B220, part of central core; phosphorylation of C-terminal heptapeptide repeat domain regulates association with transcription and splicing factors; similar to bacterial beta-prime"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
841O19897    633   RPOC1_CYACA DNA-directed RNA polymerase subun...3071e-34     146     31     49GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
842A4QJJ0    680   RPOC1_AETGR DNA-directed RNA polymerase subun...3081e-34     146     33     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
843A4QJA6    680   RPOC1_AETCO DNA-directed RNA polymerase subun...3082e-34     146     33     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
844B2XWP0    676   RPOC1_FAGEA DNA-directed RNA polymerase subun...3082e-34     146     33     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
845P56763    680   RPOC1_ARATH DNA-directed RNA polymerase subun...3082e-34     146     33     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
846A4QKI3    680   RPOC1_CAPBU DNA-directed RNA polymerase subun...3082e-34     146     33     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
847A4QL97    680   RPOC1_LEPVR DNA-directed RNA polymerase subun...3082e-34     146     33     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
848P47582    1292   RPOC_MYCGE DNA-directed RNA polymerase subuni...520.71     38.5     40     58
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
849A4QJS4    680   RPOC1_OLIPU DNA-directed RNA polymerase subun...3082e-34     146     33     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
850A4QK96    680   RPOC1_BARVE DNA-directed RNA polymerase subun...3082e-34     145     33     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
851Q4A7B0    1412   RPOC_MYCH7 DNA-directed RNA polymerase subuni...1191.9     37     23     38
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
852Q06RE0    691   RPOC1_JASNU DNA-directed RNA polymerase subun...3082e-34     145     33     47GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
853A4QLS4    680   RPOC1_NASOF DNA-directed RNA polymerase subun...3082e-34     145     33     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
854Q4A970    1412   RPOC_MYCHJ DNA-directed RNA polymerase subuni...1192     37     23     38
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
855B1A926    680   RPOC1_CARPA DNA-directed RNA polymerase subun...3082e-34     145     33     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
856Q5ZZS2    1412   RPOC_MYCH2 DNA-directed RNA polymerase subuni...1192     37     23     38
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
857A4QL10    680   RPOC1_DRANE DNA-directed RNA polymerase subun...3082e-34     145     33     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
858P46819    688   RPOC1_SINAL DNA-directed RNA polymerase subun...3082e-34     145     33     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
859A4QLI5    680   RPOC1_LOBMA DNA-directed RNA polymerase subun...3083e-34     145     33     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
860Q68S15    682   RPOC1_PANGI DNA-directed RNA polymerase subun...3083e-34     145     33     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
861A0A326    683   RPOC1_COFAR DNA-directed RNA polymerase subun...3083e-34     145     33     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
862B3TN43    682   RPOC1_BRADI DNA-directed RNA polymerase subun...3583e-34     145     31     47GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
863B3PM77    1464   RPOC_MYCA5 DNA-directed RNA polymerase subuni...450.72     38.5     38     58
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
864A8Y9G1    676   RPOC1_LOLPR DNA-directed RNA polymerase subun...3584e-34     145     31     47GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
865B1NWE1    680   RPOC1_MANES DNA-directed RNA polymerase subun...3084e-34     145     32     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
866Q09G55    682   RPOC1_PLAOC DNA-directed RNA polymerase subun...3094e-34     144     32     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
867Q589B9    687   RPOC1_SILLA DNA-directed RNA polymerase subun...3084e-34     145     32     47GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
868A1E9Z9    682   RPOC1_AGRST DNA-directed RNA polymerase subun...3585e-34     144     31     47GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
869A1XFU6    693   RPOC1_NUPAD DNA-directed RNA polymerase subun...3095e-34     144     33     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
870A1E9I2    682   RPOC1_HORVU DNA-directed RNA polymerase subun...3555e-34     144     30     46GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
871Q8S8Y0    681   RPOC1_ATRBE DNA-directed RNA polymerase subun...3085e-34     144     32     47GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
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