Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL140C
Length:
1733
Number of sequences:
5887
Description:
YDL140C RPO21 SGDID:S000002299, Chr IV from 210561-205360, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA polymerase II largest subunit B220, part of central core; phosphorylation of C-terminal heptapeptide repeat domain regulates association with transcription and splicing factors; similar to bacterial beta-prime"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
811A8ZV52    1447   RPOC_DESOH DNA-directed RNA polymerase subuni...400.032     42.7     45     70
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
812Q21M92    1410   RPOC_SACD2 DNA-directed RNA polymerase subuni...1440.003     46.6     22     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
813A3Q976    1404   RPOC_SHELP DNA-directed RNA polymerase subuni...1010.74     38.5     26     47
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
814Q31IY8    1408   RPOC_THICR DNA-directed RNA polymerase subuni...1440.04     42.7     26     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
815Q85FM8    694   RPOC1_ADICA DNA-directed RNA polymerase subun...3471e-36     153     33     46GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
816B0JSN9    626   RPOC1_MICAN DNA-directed RNA polymerase subun...3281e-36     152     31     50
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
817Q1AU23    1295   RPOC_RUBXD DNA-directed RNA polymerase subuni...1040.31     39.7     27     44
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
818Q85CL6    681   RPOC1_ANTFO DNA-directed RNA polymerase subun...3162e-36     152     34     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
819Q5GRY9    2839   RPOBC_WOLTR Bifunctional DNA-directed RNA pol...1690.008     45.1     25     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
820Q72HM6    1524   RPOC_THET2 DNA-directed RNA polymerase subuni...1060.073     41.6     25     46
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
821Q8RQE8    1524   RPOC_THET8 DNA-directed RNA polymerase subuni...1060.074     41.6     25     46
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
822Q1KXX1    689   RPOC1_HELAN DNA-directed RNA polymerase subun...3085e-36     151     34     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
823B2LMI1    696   RPOC1_GUIAB DNA-directed RNA polymerase subun...3085e-36     150     34     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
824Q56P12    689   RPOC1_LACSA DNA-directed RNA polymerase subun...3086e-36     150     34     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
825A7M957    691   RPOC1_CUSRE DNA-directed RNA polymerase subun...3087e-36     150     33     48GO:0009536; C:plastid; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
826P52733    696   RPOC1_PINTH DNA-directed RNA polymerase subun...3107e-36     150     33     47GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
827Q09MI7    680   RPOC1_CITSI DNA-directed RNA polymerase subun...3088e-36     150     34     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
828A1USC9    1403   RPOC_BARBK DNA-directed RNA polymerase subuni...1450.001     47.8     26     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
829P28363    638   RPA1_EUPOC DNA-directed RNA polymerase I subu...980.00005     52     29     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
830Q4A5S8    1492   RPOC_MYCS5 DNA-directed RNA polymerase subuni...440.83     38.1     36     59
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
831A8W3B5    691   RPOC1_CUSEX DNA-directed RNA polymerase subun...3084e-35     148     33     48GO:0009536; C:plastid; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
832Q2L8Z4    685   RPOC1_GOSHI DNA-directed RNA polymerase subun...3084e-35     148     33     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
833A9L987    690   RPOC1_LEMMI DNA-directed RNA polymerase subun...3094e-35     148     33     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
834A1QZH6    1377   RPOC_BORT9 DNA-directed RNA polymerase subuni...1440.0001     51.2     23     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
835P11705    677   RPOC1_SPIOL DNA-directed RNA polymerase subun...3087e-35     147     33     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
836Q4FQH4    1406   RPOC_PSYA2 DNA-directed RNA polymerase subuni...400.011     44.3     43     70
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
837Q3BAQ1    679   RPOC1_PHAAO DNA-directed RNA polymerase subun...3097e-35     147     33     47GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
838Q6EW57    684   RPOC1_NYMAL DNA-directed RNA polymerase subun...3097e-35     147     33     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
839A4QK09    680   RPOC1_ARAHI DNA-directed RNA polymerase subun...3089e-35     147     33     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
840Q0G9X1    677   RPOC1_DAUCA DNA-directed RNA polymerase subun...3089e-35     147     33     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
841O19897    633   RPOC1_CYACA DNA-directed RNA polymerase subun...3071e-34     146     31     49GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
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