UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YDL140C

Length:

1733

Number of sequences:

5887

Description:

YDL140C RPO21 SGDID:S000002299, Chr IV from 210561-205360, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA polymerase II largest subunit B220, part of central core; phosphorylation of C-terminal heptapeptide repeat domain regulates association with transcription and splicing factors; similar to bacterial beta-prime"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
781	Q054E1	1404	RPOC_LEPBL DNA-directed RNA polymerase subuni...	34	0.00007	51.6	65	76
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
782	Q64NJ8	1427	RPOC_BACFR DNA-directed RNA polymerase subuni...	67	0.009	44.7	37	55
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
783	Q9KV29	1401	RPOC_VIBCH DNA-directed RNA polymerase subuni...	101	1.3	37.7	25	47
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
784	A5F3P6	1401	RPOC_VIBC3 DNA-directed RNA polymerase subuni...	101	1.3	37.7	25	47
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
785	Q5L898	1427	RPOC_BACFN DNA-directed RNA polymerase subuni...	67	0.01	44.7	37	55
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
786	Q8MA11	661	RPOC1_CHAGL DNA-directed RNA polymerase subun...	357	2e-37	155	32	50	GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
787	Q3ZJ92	1578	RPOC1_PSEAK DNA-directed RNA polymerase subun...	311	2e-37	158	32	50	GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
788	Q85WS8	696	RPOC1_PINKO DNA-directed RNA polymerase subun...	302	2e-37	155	36	47	GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
789	A8G8E8	1408	RPOC_SERP5 DNA-directed RNA polymerase subuni...	144	0.0007	48.5	26	42
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
790	B0YPL9	699	RPOC1_ANEMR DNA-directed RNA polymerase subun...	310	2e-37	155	34	49	GO:0009536; C:plastid; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
791	B0C2D1	623	RPOC1_ACAM1 DNA-directed RNA polymerase subun...	561	2e-37	154	26	43
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
792	Q3BWZ0	1404	RPOC_XANC5 DNA-directed RNA polymerase subuni...	144	0.0006	48.5	26	40
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
793	Q8PNS9	1404	RPOC_XANAC DNA-directed RNA polymerase subuni...	144	0.0006	48.5	26	40
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
794	Q5P338	1409	RPOC_AROAE DNA-directed RNA polymerase subuni...	144	0.002	47.4	26	39
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
795	P74177	626	RPOC1_SYNY3 DNA-directed RNA polymerase subun...	327	2e-37	154	31	49
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
796	Q06J18	760	RPOC1_BIGNA DNA-directed RNA polymerase subun...	317	2e-37	155	31	50	GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
797	Q6KI08	1424	RPOC_MYCMO DNA-directed RNA polymerase subuni...	44	0.11	41.2	41	61
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
798	A1R8V3	1299	RPOC_ARTAT DNA-directed RNA polymerase subuni...	43	0.42	39.3	42	60
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
799	B8HD15	1299	RPOC_ARTCA DNA-directed RNA polymerase subuni...	43	0.46	39.3	42	60
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
800	A0JZ92	1299	RPOC_ARTS2 DNA-directed RNA polymerase subuni...	43	0.44	39.3	42	60
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
801	Q2JFI4	1295	RPOC_FRASC DNA-directed RNA polymerase subuni...	43	0.12	40.8	44	63
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
802	A8LC63	1296	RPOC_FRASN DNA-directed RNA polymerase subuni...	43	0.12	40.8	44	63
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
803	Q0RRS9	1296	RPOC_FRAAA DNA-directed RNA polymerase subuni...	43	0.13	40.8	44	63
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
804	B4UDT1	1394	RPOC_ANASK DNA-directed RNA polymerase subuni...	39	0.002	47	51	74
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
805	Q2NJ16	1353	RPOC_AYWBP DNA-directed RNA polymerase subuni...	171	0.002	46.6	24	41
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
806	Q6YQW2	1353	RPOC_ONYPE DNA-directed RNA polymerase subuni...	171	0.0009	48.1	24	41
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
807	Q2II85	1394	RPOC_ANADE DNA-directed RNA polymerase subuni...	39	0.002	47	51	74
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
808	Q0VSM1	1400	RPOC_ALCBS DNA-directed RNA polymerase subuni...	40	0.003	46.6	48	70
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
809	Q06FX0	701	RPOC1_PELHO DNA-directed RNA polymerase subun...	315	6e-37	154	33	48	GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
810	Q5E239	1401	RPOC_VIBF1 DNA-directed RNA polymerase subuni...	101	0.56	38.9	25	48
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
811	A8ZV52	1447	RPOC_DESOH DNA-directed RNA polymerase subuni...	40	0.032	42.7	45	70
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.

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