Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL140C
Length:
1733
Number of sequences:
5887
Description:
YDL140C RPO21 SGDID:S000002299, Chr IV from 210561-205360, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA polymerase II largest subunit B220, part of central core; phosphorylation of C-terminal heptapeptide repeat domain regulates association with transcription and splicing factors; similar to bacterial beta-prime"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
751B7JWQ8    625   RPOC1_CYAP8 DNA-directed RNA polymerase subun...5602e-38     158     26     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
752Q7W0R8    1414   RPOC_BORPE DNA-directed RNA polymerase subuni...1000.002     46.6     32     48
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
753Q7W2G8    1414   RPOC_BORPA DNA-directed RNA polymerase subuni...1000.002     46.6     32     48
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
754Q7WRD8    1414   RPOC_BORBR DNA-directed RNA polymerase subuni...1000.002     46.6     32     48
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
755A5WH34    1406   RPOC_PSYWF DNA-directed RNA polymerase subuni...400.018     43.9     43     68
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
756Q87A33    1407   RPOC_XYLFT DNA-directed RNA polymerase subuni...1440.0003     49.3     26     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
757B2IA67    1407   RPOC_XYLF2 DNA-directed RNA polymerase subuni...1440.0003     49.3     26     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
758Q3SLQ5    1398   RPOC_THIDA DNA-directed RNA polymerase subuni...1460.033     42.7     25     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
759A9IJ22    1412   RPOC_BORPD DNA-directed RNA polymerase subuni...1460.002     46.6     26     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
760P42080    636   RPOC1_CYAPA DNA-directed RNA polymerase subun...5603e-38     157     26     45GO:0009842; C:cyanelle; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
761Q9CK92    1417   RPOC_PASMU DNA-directed RNA polymerase subuni...1440.001     47.8     26     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
762Q8UE09    1402   RPOC_AGRT5 DNA-directed RNA polymerase subuni...1450.013     44.3     26     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
763Q4FLL3    1389   RPOC_PELUB DNA-directed RNA polymerase subuni...1910.076     41.6     24     46
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
764Q07KK8    1400   RPOC_RHOP5 DNA-directed RNA polymerase subuni...530.0003     49.7     42     66
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
765P49467    843   RPOC1_ODOSI DNA-directed RNA polymerase subun...3094e-38     159     33     50GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
766A9M3X3    1391   RPOC_NEIM0 DNA-directed RNA polymerase subuni...1810.001     47.8     24     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
767Q5F5R6    1391   RPOC_NEIG1 DNA-directed RNA polymerase subuni...1810.001     47.8     24     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
768Q9K1J1    1391   RPOC_NEIMB DNA-directed RNA polymerase subuni...1810.001     47.8     24     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
769Q9PA87    1407   RPOC_XYLFA DNA-directed RNA polymerase subuni...1440.0003     49.3     26     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
770B4RQW3    1391   RPOC_NEIG2 DNA-directed RNA polymerase subuni...1810.0008     48.1     24     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
771A8LM41    1415   RPOC_DINSH DNA-directed RNA polymerase subuni...1450.003     46.6     27     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
772B0U5X6    1411   RPOC_XYLFM DNA-directed RNA polymerase subuni...1440.0003     49.3     26     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
773Q9JX03    1391   RPOC_NEIMA DNA-directed RNA polymerase subuni...1810.001     47.8     24     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
774Q47LI6    1291   RPOC_THEFY DNA-directed RNA polymerase subuni...1440.16     40.4     24     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
775B1W441    1299   RPOC_STRGG DNA-directed RNA polymerase subuni...1730.001     47.8     25     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
776P60288    679   RPOC1_PHYPA DNA-directed RNA polymerase subun...3115e-38     157     34     50GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
777Q8A470    1427   RPOC_BACTN DNA-directed RNA polymerase subuni...590.049     42.4     37     54
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
778P06273    684   RPOC1_MARPO DNA-directed RNA polymerase subun...3776e-38     157     31     47GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
779A7HCH6    1395   RPOC_ANADF DNA-directed RNA polymerase subuni...390.001     47.4     51     74
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
780Q7N9A3    1406   RPOC_PHOLL DNA-directed RNA polymerase subuni...400.004     45.8     48     70
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
781Q054E1    1404   RPOC_LEPBL DNA-directed RNA polymerase subuni...340.00007     51.6     65     76
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
records
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