Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL140C
Length:
1733
Number of sequences:
5887
Description:
YDL140C RPO21 SGDID:S000002299, Chr IV from 210561-205360, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA polymerase II largest subunit B220, part of central core; phosphorylation of C-terminal heptapeptide repeat domain regulates association with transcription and splicing factors; similar to bacterial beta-prime"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
721Q98N65    1398   RPOC_RHILO DNA-directed RNA polymerase subuni...1450.003     46.6     26     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
722C4LBV1    1434   RPOC_TOLAT DNA-directed RNA polymerase subuni...1190.0007     48.5     34     49
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
723A9WH11    1503   RPOC_CHLAA DNA-directed RNA polymerase subuni...2250.000000007     64.7     25     47
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
724B8G4U8    1500   RPOC_CHLAD DNA-directed RNA polymerase subuni...2250.0000000007     68.2     25     48
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
725A2C4N1    635   RPOC1_PROM1 DNA-directed RNA polymerase subun...5182e-39     160     27     44
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
726A4SUV5    1420   RPOC_POLSQ DNA-directed RNA polymerase subuni...1440.008     44.7     28     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
727Q60A05    1400   RPOC_METCA DNA-directed RNA polymerase subuni...2870.000003     55.8     24     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
728A8M538    1297   RPOC_SALAI DNA-directed RNA polymerase subuni...1690.0007     48.1     25     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
729A9KW96    1405   RPOC_SHEB9 DNA-directed RNA polymerase subuni...400.012     44.3     48     65
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
730A6WHS2    1405   RPOC_SHEB8 DNA-directed RNA polymerase subuni...400.012     44.3     48     65
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
731B8EBL1    1405   RPOC_SHEB2 DNA-directed RNA polymerase subuni...400.012     44.3     48     65
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
732Q8EK73    1405   RPOC_SHEON DNA-directed RNA polymerase subuni...400.008     45.1     48     68
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
733Q46J23    635   RPOC1_PROMT DNA-directed RNA polymerase subun...4903e-39     160     27     45
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
734Q2L2L3    1413   RPOC_BORA1 DNA-directed RNA polymerase subuni...1000.002     47     33     47
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
735A4XBQ5    1297   RPOC_SALTO DNA-directed RNA polymerase subuni...1690.0007     48.1     25     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
736P96177    1046   RPOC_WEIHE DNA-directed RNA polymerase subuni...600.000000003     66.2     53     70
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
737Q8WI25    674   RPOC1_PSINU DNA-directed RNA polymerase subun...3126e-39     160     34     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
738Q2GFP4    1410   RPOC_EHRCR DNA-directed RNA polymerase subuni...1560.005     45.4     24     44
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
739Q1ACN5    666   RPOC1_CHAVU DNA-directed RNA polymerase subun...3177e-39     159     32     50GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
740Q3J8Q8    1403   RPOC_NITOC DNA-directed RNA polymerase subuni...400.003     46.2     48     70
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
741A6BM51    747   RPOC1_GNEPA DNA-directed RNA polymerase subun...3107e-39     160     34     49GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
742Q6DAM9    1407   RPOC_ERWCT DNA-directed RNA polymerase subuni...1440.0004     49.3     24     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
743Q55085    636   RPOC1_SYNP2 DNA-directed RNA polymerase subun...3299e-39     159     32     50
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
744P96178    1054   RPOC_WEIPA DNA-directed RNA polymerase subuni...600.000000003     65.9     53     70
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
745A4FPP2    1303   RPOC_SACEN DNA-directed RNA polymerase subuni...1730.22     40     23     38
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
746B1VKH4    698   RPOC1_CRYJA DNA-directed RNA polymerase subun...3231e-38     159     35     49GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
747Q88QP1    1399   RPOC_PSEPK DNA-directed RNA polymerase subuni...1800.001     47.8     25     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
748A7MQQ8    1407   RPOC_CROS8 DNA-directed RNA polymerase subuni...1440.002     47.4     24     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
749A5VXP1    1399   RPOC_PSEP1 DNA-directed RNA polymerase subuni...1800.001     47.8     25     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
750Q4G3A6    609   RPOC1_EMIHU DNA-directed RNA polymerase subun...3302e-38     158     31     49GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
751B7JWQ8    625   RPOC1_CYAP8 DNA-directed RNA polymerase subun...5602e-38     158     26     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
records
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