Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL140C
Length:
1733
Number of sequences:
5887
Description:
YDL140C RPO21 SGDID:S000002299, Chr IV from 210561-205360, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA polymerase II largest subunit B220, part of central core; phosphorylation of C-terminal heptapeptide repeat domain regulates association with transcription and splicing factors; similar to bacterial beta-prime"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
691A7NJM0    1502   RPOC_ROSCS DNA-directed RNA polymerase subuni...430.007     45.1     44     67
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
692Q089R0    1408   RPOC_SHEFN DNA-directed RNA polymerase subuni...400.024     43.1     48     65
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
693A9B6J1    1543   RPOC_HERA2 DNA-directed RNA polymerase subuni...1720.000001     57.8     27     47
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
694B2J199    625   RPOC1_NOSP7 DNA-directed RNA polymerase subun...5609e-40     162     26     44
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
695B1WP07    628   RPOC1_CYAA5 DNA-directed RNA polymerase subun...5519e-40     162     26     44
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
696P42079    624   RPOC1_SYNE7 DNA-directed RNA polymerase subun...3079e-40     162     33     51
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
697Q12SW5    1410   RPOC_SHEDO DNA-directed RNA polymerase subuni...400.013     44.3     48     65
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
698B1KMY9    1405   RPOC_SHEWM DNA-directed RNA polymerase subuni...1920.013     44.3     23     38
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
699A4XZ96    1399   RPOC_PSEMY DNA-directed RNA polymerase subuni...1800.0007     48.5     26     41
GO:0050662; F:coenzyme binding; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0016616; F:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; IEA:InterPro.
700Q5MZ22    624   RPOC1_SYNP6 DNA-directed RNA polymerase subun...3071e-39     162     33     51
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
701Q5X865    1401   RPOC_LEGPA DNA-directed RNA polymerase subuni...1800.0002     50.1     23     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
702Q0AF54    1404   RPOC_NITEC DNA-directed RNA polymerase subuni...1670.0004     49.3     26     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
703A5IHS0    1401   RPOC_LEGPC DNA-directed RNA polymerase subuni...1800.0002     50.1     23     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
704Q9MUS6    668   RPOC1_MESVI DNA-directed RNA polymerase subun...3121e-39     162     33     51GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
705Q6MRX5    1255   RPOC_MYCMS DNA-directed RNA polymerase subuni...1022.9     36.6     24     45
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
706Q0HNU3    1405   RPOC_SHESM DNA-directed RNA polymerase subuni...1920.004     45.8     26     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
707Q0I0B1    1405   RPOC_SHESR DNA-directed RNA polymerase subuni...400.008     45.1     48     68
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
708A2T323    687   RPOC1_ANGEV DNA-directed RNA polymerase subun...3122e-39     162     35     50GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
709Q5WZL8    1401   RPOC_LEGPL DNA-directed RNA polymerase subuni...1800.0002     50.1     23     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
710A0T0R0    732   RPOC1_THAPS DNA-directed RNA polymerase subun...3332e-39     162     32     50GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
711B7KK78    625   RPOC1_CYAP7 DNA-directed RNA polymerase subun...3282e-39     161     32     51
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
712A1REA8    1405   RPOC_SHESW DNA-directed RNA polymerase subuni...400.013     44.3     48     65
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
713A4YBY9    1405   RPOC_SHEPC DNA-directed RNA polymerase subuni...400.013     44.3     48     65
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
714Q5ZYP9    1401   RPOC_LEGPH DNA-directed RNA polymerase subuni...1800.0002     50.1     23     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
715A0KRL8    1405   RPOC_SHESA DNA-directed RNA polymerase subuni...400.008     45.1     48     68
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
716Q9KW13    1409   RPOC_SHEVI DNA-directed RNA polymerase subuni...400.014     43.9     48     65
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
717A6X0B0    1400   RPOC_OCHA4 DNA-directed RNA polymerase subuni...1460.002     47     23     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
718Q47JA9    1403   RPOC_DECAR DNA-directed RNA polymerase subuni...1440.003     46.2     25     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
719B9LL90    1503   RPOC_CHLSY DNA-directed RNA polymerase subuni...2250.0000000005     68.6     26     48
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
720A6W398    1400   RPOC_MARMS DNA-directed RNA polymerase subuni...1440.037     42.7     25     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
721Q98N65    1398   RPOC_RHILO DNA-directed RNA polymerase subuni...1450.003     46.6     26     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
records
Previous ‹‹ ›› Next Total records: 1000 691 - 720
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::